Job Description P05804 Confidence 99.70% Date Thu Jan 5 10:58:55 GMT 2012 Rank 78 Aligned Residues 237 % Identity 16% Template d1ur1a_ SCOP info TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Resolution 1.43

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		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	M	L	D	W	A	D	E	H	G	I	V	V	I	D	E	T	A	A	V	G	F	N	L	S	L	G	I	G	F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	D	K	N	H	P	S	V	V	M	W	S	I	A	N	E	P
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.																									.	.
Template Conservation																																							.	.	.	.	.	.	.																									.	.
Template Sequence		D	A	F	V	A	F	G	T	K	H	N	L	H	M	V	G	H	T	L	V	W	H	S	Q	I	H	D	E	V	F	K	N	A	D	G	S	Y	.	.	.	.	.	.	.	I	S	K	A	A	L	Q	K	K	M	E	E	H	I	T	T	L	A	G	R	Y	K	G	K	.	.	L	A	A	W	D	V	V	N	E	A
Template Known Secondary structure											T	T											S	S	S	S		G	G	G	T	B		T	T	S		B	.	.	.	.	.	.	.																					T	T	T	T	.	.		S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.																									.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.								.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.
		415	.	.	.											.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.												.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	T	R	P	.	.	.	.	.	.	.	.	.	.	Q	G	A	R	E	Y	F	A	P	L	A	E	A	T	R	K	L	D	P	T	R	P	I	T	C	V	N	V	M	F	C	D	A	H	T	D	.	.	.	.	.	.	.	.	.	.	.	T	I	S	D	L	F	D	V	L	C	L	N	R	Y	Y	G	W	Y	V
Query Conservation						.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation																																																																														.	.
Template Sequence		V	G	D	D	L	K	M	R	D	S	H	W	Y	K	I	M	G	D	D	F	I	Y	N	A	F	T	L	A	N	E	V	D	P	K	A	H	L	M	Y	N	D	Y	N	I	E	R	T	G	K	R	E	A	T	V	E	M	I	E	R	L	Q	K	R	G	M	P	I	H	G	L	G	I	Q	G	H	L	.	.	G	I
Template Known Secondary structure		B		T	T	S	S	B										T	T															T	T	S							S	S	T	T	S	T	T															T	T													.	.		S
Template Predicted Secondary structure																																																																														.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.			.	.
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.																	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	S	G	D	L	E	T	A	E	K	V	L	E	K	E	L	L	A	W	Q	E	K	L	H	Q	P	I	I	I	T	E	Y	G	V	D	T	L	A	G	L	H	S	M	Y	T	D	M	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	E	Y	Q	C	A	W	L	D	M	Y	H	R	V	F
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		D	T	P	P	I	A	E	I	E	K	S	I	I	A	F	A	.	.	.	.	.	K	L	G	L	R	V	H	F	T	S	L	D	V	D	V	L	P	S	V	W	E	E	V	S	T	R	F	E	Y	K	P	E	R	D	P	Y	T	K	G	L	P	Q	E	M	Q	D	K	L	A	K	R	Y	E	D	L	F	K	L	F
Template Known Secondary structure		S		S														.	.	.	.	.	T	T	T													S							T	T	T	T	T	S			G	G	G		T	T	T	T
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.						.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		538	.	540	.		.	.	.	.	.	.	.	.	550	.	.	.			.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
Predicted Secondary structure						.													.	.
Query SS confidence						.													.	.
Query Sequence		D	R	V	S	.	A	V	V	G	E	Q	V	W	N	F	A	D	.	.	F	A	T	S	Q	G	I	L	R	V	G	G	N	K	K	G	I	F	T	R	D	R	K	P	K	S	A	A	F	L	L	Q	K	R
Query Conservation						.													.	.
Alig confidence						.													.	.
Template Conservation
Template Sequence		I	K	H	S	D	K	I	D	R	A	T	F	W	G	V	S	D	D	A	S	W	L	N	G	F	P	I	P	G	R	T	N	Y	P	L	L	F	D	R	K	L	Q	P	K	D	A	Y	F	R	L	L	D	L
Template Known Secondary structure				T	T	T	T							S		S	B	G	G	G		G	G	G	T	S	S	S	T	T						S	S	B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions