Return to main results Retrieve Phyre Job Id

Job DescriptionP05804
Confidence79.07%DateThu Jan 5 10:58:55 GMT 2012
Rank211Aligned Residues91
% Identity15%Templated1uoka2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   307..310.........320........ .330.... .....340.........350........
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Query Sequence  DNVLMVHDHALMDWIGANSYRT. . . . . . . . . . SHYPYA. . . . . . . . . . . . . . . EEMLDWADEHGIVVIDETAAVGFN. . .
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Template Sequence  DLRGIISKLDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDLVVNHTSDEH
Template Known Secondary structure 
TTT







TTTTSS
S
GGG

TT


SB

TTS
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   2930.........40.........50.........60.........70.........80.........90.........100........
 
   359360.........370.........380.........390.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LSLGIGFEAGNKPKELYSEEAVNGETQQAHLQAIKEL
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Template Sequence  NWFIESRKSKDNKYRDYYIWRPGKEGKEPNNWGAAFSGSAWQYDEMTDEYYLHLFSKKQPDLNWDNEKVRQDVYEMMKFW
Template Known Secondary structure  TT
TT
TTGGGB


SSSS
SS
BB
TTSSBSTTTT
SS
TTS
BB
TTS
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   109110.........120.........130.........140.........150.........160.........170.........180........
 
   396.
Predicted Secondary structure 
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Query Sequence  IA
Query Conservation 
 
Alig confidence 

Template Conservation 
 
Template Sequence  LE
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   189190
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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