Return to main results Retrieve Phyre Job Id

Job DescriptionP05804
Confidence74.21%DateThu Jan 5 10:58:55 GMT 2012
Rank228Aligned Residues67
% Identity16%Templated1ud2a2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.13

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   284.....290.........300.........310.........320.........330....
Predicted Secondary structure 























.............................
Query SS confidence 


















































. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  NHKPFYFTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHYPYA. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 



  


 
        
           
   
  
 
 

       .............................
Alig confidence 


















....



























.............................
Template Conservation           
       

....   

  

 

  


 



 

         


  
 
          


  
Template Sequence  GLNGTMMQYYEWHLENDGQ. . . . HWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKY
Template Known Secondary structure 







TT


SS
....T




SSSTT

SSSTT
SS
S
BTTBSS
SS
Template Predicted Secondary structure 











....







































Template SS confidence 















































































   2.......10.........20 .........30.........40.........50.........60.........70.......
 
   335....340.........350....
Predicted Secondary structure  ......





Query SS confidence  . . . . . .



















Query Sequence  . . . . . . EEMLDWADEHGIVVIDETAA
Query Conservation  ......    
 


 



  
   
Alig confidence  ......



















Template Conservation 

  

  

  

  






 
 
Template Sequence  GTKAQLERAIGSLKSNDINVYGDVVM
Template Known Secondary structure 

TT


Template Predicted Secondary structure 




Template SS confidence 

























   78.80.........90.........100...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions