Return to main results Retrieve Phyre Job Id

Job DescriptionP05804
Confidence100.00%DateThu Jan 5 10:58:55 GMT 2012
Rank23Aligned Residues308
% Identity12%Templated1tg7a5
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Glycosyl hydrolases family 35 catalytic domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  RSVAVKGEQFLINHKPFYFTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRT. . . . . SHYPYA. . . . . . . . . . . E
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Template Sequence  KYVTWDEHSIFVNGERLMIFSGEVHPY. . . . . RLPVASLYIDIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQ
Template Known Secondary structure  SS
SS
TT


GG.....GS

GGGTTT




SBTTB



GGG
S
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Query Sequence  EMLDWADEHGIVVIDETAAVGFNLSLGIGFEAGNKPKELYSEEAVNGETQQAHLQAIKELIARD. . . . . KNHPSVVMWSI
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Template Sequence  PFFDAAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVDGIL. RTSDEAYLKATDNYASNIAATIAKAQITNGGPIILYQP
Template Known Secondary structure  T


S


TTBGGGG

GGGGG
SS
T.TSS
TBGGGTSS

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Query Sequence  ANE. . . . . PDTRPQGAREYFAPLAEATRKLDPTRPITCVNVMFCDAHTDT. ISDLFDVLCLNRYYGWYVQSGDLETAEKV
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Template Sequence  ENEYSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSGN
Template Known Secondary structure  SS





TT



S
TT

S
BB

BSSSS
TT
TTS
TT

SB

TT
S

S
TT


TT
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Query Sequence  LEKELLAWQE. . KLHQPIIITEYGVDTLAGLHSMYTDMWSEEYQCAWLDMYHRVFDRVSAVV. . . . . . . GEQVWNFADFA
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Template Sequence  LPTYFHTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFLNLYMIFGGTNWGNLGHP
Template Known Secondary structure  S



TTS

SS



TT


TSTTT
S
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TT
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   278.280.........290.........300.........310.........320.........330.........340.........350.......
 
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Query Sequence  TSQGILRVGGNKKGIFTRDRKPKSAAFLLQKRWT
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Template Sequence  GGYTSYDYG. . . . SAISESRNITREKYSELKLLG
Template Known Secondary structure  TS
SB

TT....
SB
TT



S
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   358.360...... ...370.........380.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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