Job Description P05804 Confidence 100.00% Date Thu Jan 5 10:58:55 GMT 2012 Rank 25 Aligned Residues 290 % Identity 15% Template d1rh9a1 SCOP info TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Resolution 1.50

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		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330																					.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	V	K	G	E	Q	F	L	I	N	H	K	P	F	Y	F	T	G	F	G	R	H	E	D	A	D	L	R	G	K	G	F	D	N	V	L	M	V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	Y
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	Y	T	D	G	T	H	F	A	L	N	G	K	S	L	Y	I	N	G	F	N	A	Y	W	L	M	Y	I	A	Y	D	P	S	T	R	I	K	V	T	N	T	F	Q	Q	A	S	K	Y	K	M	N	V	A	R	T	W	A	F	S	H	G	G	S	R	P	L	Q	S	A	P	G	V	Y	N	E	Q	M	F	Q	G
Template Known Secondary structure						T	T					T	T											T	T							S	T	T	T	T													T	T								S	S		S	S	S	S	S		S				T	T
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.					.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.									.	400	.
Predicted Secondary structure																																	.	.	.	.																																			.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.																																			.	.	.	.	.	.	.	.
Query Sequence		A	E	E	M	L	D	W	A	D	E	H	G	I	V	V	I	D	E	T	A	A	V	G	F	N	L	S	L	G	I	G	.	.	.	.	F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	.	.	.	.	.	.	.	.	D	K	N
Query Conservation																																	.	.	.	.																																			.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.																																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	F	V	I	S	E	A	K	K	Y	G	I	H	L	I	M	S	L	V	N	N	W	D	A	F	G	G	K	K	Q	Y	V	E	W	A	V	Q	R	G	Q	K	L	T	S	D	D	D	F	F	T	N	P	M	V	K	G	F	Y	K	N	N	V	K	V	V	L	T	R	V	N	T	I	T	K	V	A	Y	K	D
Template Known Secondary structure												T	T									B	S	S	S	S	S	S	B											T	T						G	G	G	G	G	T																			B		T	T	T		S	B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.					420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.																	.	.	.	460	.
Predicted Secondary structure																				.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	P	S	V	V	M	W	S	I	A	N	E	P	D	T	R	P	Q	.	.	.	.	G	A	R	E	Y	F	A	P	L	A	E	A	T	R	K	L	D	P	T	R	P	I	T	C	V	N	V	M	F	C	D	A	H	T	D	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	L	F	D
Query Conservation																				.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	P	T	I	L	S	W	E	L	I	N	E	P	R	C	P	S	D	L	S	G	K	T	F	Q	N	W	V	L	E	M	A	G	Y	L	K	S	I	D	S	N	H	L	L	E	I	G	L	E	G	F	Y	G	N	D	M	R	Q	Y	N	P	N	S	Y	I	F	G	T	N	F	I	S	N	N	Q	V	Q	G	I	D
Template Known Secondary structure			T	T						S		B	S				T	T		T	T	S																				S	S												G	G	G	G	G	G	S	G	G	G				S								T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.				.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		V	L	C	L	N	R	Y	Y	G	W	Y	V	Q	S	G	D	L	E	T	A	E	K	V	L	E	K	E	L	L	A	W	Q	E	.	.	.	K	L	H	Q	P	I	I	I	T	E	Y	G	V	D	T	L	A	G	L	H	S	M	Y	T	D	M	W	S	E	E	Y	Q	C	A	W	L	D	M	Y	H	R	V	F	D
Query Conservation																																			.	.	.
Alig confidence																																			.	.	.														.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.
Template Sequence		F	T	T	I	H	M	Y	P	N	Q	W	L	P	G	L	T	Q	E	A	Q	D	K	W	A	S	Q	W	I	Q	V	H	I	D	D	S	K	M	L	K	K	P	L	L	I	A	E	F	G	K	.	.	.	.	.	.	.	S	T	K	T	P	G	Y	T	V	A	K	R	D	N	Y	F	E	K	I	Y	G	T	I	F
Template Known Secondary structure													S	T	T	S																								T	S										.	.	.	.	.	.	.		T	T	S	T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.								.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		539					540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.
Predicted Secondary structure			.	.	.	.
Query SS confidence			.	.	.	.
Query Sequence		R	.	.	.	.	V	S	A	V	V	G	E	Q	V	W	N	F	A	D	F	A	T	S	Q	G	I	L	R	V	G	G	N	K	K	G	I	F	T	R	D	R
Query Conservation			.	.	.	.
Alig confidence			.	.	.	.																							.	.	.	.	.
Template Conservation																													.	.	.	.	.
Template Sequence		N	C	A	K	S	G	G	P	C	G	G	G	L	F	W	Q	V	L	G	Q	G	M	S	S	F	D	D	.	.	.	.	.	G	Y	Q	V	V	L	Q	E	S
Template Known Secondary structure						T	T		S							S		B			T	T		G	G	G			.	.	.	.	.	S			B		G	G	G
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.						.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions