Job Description P05804 Confidence 43.74% Date Thu Jan 5 10:58:55 GMT 2012 Rank 298 Aligned Residues 86 % Identity 17% Template d1nkga2 SCOP info Galactose-binding domain-like Galactose-binding domain-like Rhamnogalacturonase B, RhgB, C-terminal domain Resolution 1.50

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.																	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query SS confidence																								.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query Sequence		Y	Q	R	E	V	F	I	P	K	G	W	A	G	Q	R	I	V	L	R	F	D	A	.	.	.	V	T	H	Y	G	K	V	W	V	N	N	Q	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	E	H	Q	G	G	Y	T	P	F	E	A	D	V	.	T	P	Y	V	I	A	G	K	S	V
Query Conservation																								.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Alig confidence																								.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.								.
Template Conservation																																																																															.
Template Sequence		V	T	I	K	F	T	A	T	S	A	Q	T	G	A	A	T	L	R	I	G	T	T	L	S	F	A	G	G	R	P	Q	A	T	I	N	S	Y	T	G	S	A	P	A	A	P	T	N	L	D	S	R	G	V	T	R	G	A	Y	R	G	L	G	E	V	Y	D	V	S	I	P	S	G	T	I	V	A	G	.	T	N
Template Known Secondary structure										G	G	G		S													T	T								T	T														S			G	G	G	T				S											T	T	S	S		S		.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.		.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	T	V	C	V	N	N	E	L	N	W	Q	T	I	P	P	G	M	V	I	T	D	E	N	G	K	K	K	Q	S	Y	F	H	D	F	F	N	Y	A	G	I	H	R	S	V	M	L
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	I	T	I	N	V	I	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	G	D	T	Y	L	S	P	N	F	I	F	D	C	V	E	L
Template Known Secondary structure										S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	G	G	G	S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		480	.	.	.	.	.	.	.	.																						.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions