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Job Description | P05804 | Confidence | 58.95% | Date | Thu Jan 5 10:58:55 GMT 2012 |
Rank | 267 | Aligned Residues | 92 |
% Identity | 14% | Template | d1lwha2 |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Amylase, catalytic domain
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Resolution | 2.60 |
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307 | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | |
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. | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | N | V | L | M | V | H | D | H | A | L | M | D | W | I | G | A | N | S | Y | R | T | . |
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E | E | M | L | D | W | A | D | E | H | G | I | V | V | I | D | E | T | A | A | V | G | F | N | L | S | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | F | R | G | L | K | N | A | V | S | Y | L | K | E | L | G | I | D | F | V | W | L | M | P | V | F | S | S | I | S | F | H | G | Y | D | V | V | D | F | Y | S | F | K | A | E | Y | G | S | E | R | E | F | K | E | M | I | E | A | F | H | D | S | G | I | K | V | V | L | D | L | P | I | H | H | T | G | F | L | H | T |
Template Known Secondary structure |   |
|  |  |  |  |  |  | T |  |  |  |  |  |  | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
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361 | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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L | G | I | G | F | E | A | G | N | K | P | K | E | L | Y | S | E | E | A | V | N | G | E | T | Q | Q | A | H | L | Q | A | I | K | E | L | I | A | R |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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Alig confidence |   |
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Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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Template Sequence |   |
W | F | Q | K | A | L | K | G | D | P | H | Y | R | D | Y | Y | V | W | A | N | K | E | T | D | L | D | E | R | R | E | W | D | G | E | K | I | W | H | P | L | E | D | G | R | F | Y | R | G | L | F | G | P | F | S | P | D | L | N | Y | D | N | P | Q | V | F | D | E | M | K | R | L | V | L | H | L | L | D | M |
Template Known Secondary structure |   |
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| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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