Return to main results Retrieve Phyre Job Id

Job DescriptionP05804
Confidence58.95%DateThu Jan 5 10:58:55 GMT 2012
Rank267Aligned Residues92
% Identity14%Templated1lwha2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   307..310.........320........ .330.... .....340.........350.........360
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Query Sequence  DNVLMVHDHALMDWIGANSYRT. . . . . . . . . SHYPYA. . . . . . . . . . . . . . . EEMLDWADEHGIVVIDETAAVGFNLS. .
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Template Sequence  DFRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDLPIHHTGFLHT
Template Known Secondary structure 
TTT
S



SSSS

S
S
GGG

TT

TTB

TTS
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   21........30.........40.........50.........60.........70.........80.........90.........100
 
   361........370.........380.........390........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LGIGFEAGNKPKELYSEEAVNGETQQAHLQAIKELIAR
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Template Sequence  WFQKALKGDPHYRDYYVWANKETDLDERREWDGEKIWHPLEDGRFYRGLFGPFSPDLNYDNPQVFDEMKRLVLHLLDM
Template Known Secondary structure  TT
TTB
B

TT

TT
B
SSS

B

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TT
TTS
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   101........110.........120.........130.........140.........150.........160.........170........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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