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Job DescriptionP05804
Confidence100.00%DateThu Jan 5 10:58:55 GMT 2012
Rank15Aligned Residues275
% Identity25%Templated1jz8a5
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   273......280.........290.........300.........310.........320.........330.........340.........350..
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Query Sequence  SVAVKGEQFLINHKPFYFTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHYPYAEEMLDWADEHGIVVIDET
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Template Sequence  EVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEA
Template Known Secondary structure 
TTTT





BTTTBT


TT


TTS


T

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   334.....340.........350.........360.........370.........380.........390.........400.........410...
 
   353......360.........370.........380.........390.........400.........410.........420.........430..
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Query Sequence  AAVGFNLSLGIGFEAGNKPKELYSEEAVNGETQQAHLQAIKELIARDKNHPSVVMWSIANEPDTRPQGAREYFAPLAEAT
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Template Sequence  NIETHGMVPMNRLTD. . . . . . . . . . . . . DPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGH. . . . . GANHDALYRWI
Template Known Secondary structure  S


TTSSSTTTTTT.............
GGGTT
TT

SS


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   414.....420........ .430.........440.........450.........460.... .....470.....
 
   433......440.........450.........460.........470.........480.........490.........500.........510..
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Query Sequence  RKLDPTRPITCVNVMFCDAHTDTISDLFDVLCLNRYYGWYVQSGDLETAEKVLEKELLAWQEKLHQPIIITEYGVDTLAG
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Template Sequence  KSVDPSRPVQYEGGGADTT. . . . . . . ATDIICPM. YARVDEDQPFPAVPKWSIKKWLSLP. . GETRPLILCQYAHAMGNS
Template Known Secondary structure 
TTS


TTTSSST.......T
SSB

B.S

SS

B

SSS
B

TTST..T



S


SS
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   476...480.........490.... .....500.. .......510.........520....... ..530.........540.....
 
   513......520.........530.........540.........550....... ..560.........570.....
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Query Sequence  LHSMYTDMWSEEYQCAWLDMYHRVFDRVSAVVGEQVWNFADFATS. . . . . . . . . . . . . . . . . QGILRVGGNKKGIFTRDR
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Template Sequence  LGG. . . . . . . . . . . . . . FAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADR
Template Known Secondary structure 
TT..............
TTS
SB



TT


TTTTS
SS

GGGG


SB
TTS
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   546.. .550.........560.........570.........580.........590.........600.........610.
 
   576...580.........
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Query Sequence  KPKSAAFLLQKRWT
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Template Sequence  TPHPALTEAKHQQQ
Template Known Secondary structure 
B
TT
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   612.......620.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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