Job Description P05804 Confidence 99.41% Date Thu Jan 5 10:58:55 GMT 2012 Rank 112 Aligned Residues 262 % Identity 23% Template d1gnxa_ SCOP info TIM beta/alpha-barrel (Trans)glycosidases Family 1 of glycosyl hydrolase Resolution 1.68

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		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.																		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	M	V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	S	H	Y	P	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	M	L	D	W	A	D	E	H	G	I	V	V	I	D	E	T	A	A	V	G	F	N	L	S	L	G	I	G	F	E	A	G	N	K	P
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		H	R	W	R	E	D	V	A	L	M	A	E	L	G	L	G	A	Y	R	F	S	L	A	W	P	R	I	Q	P	T	G	R	G	P	A	L	Q	K	G	L	D	F	Y	R	R	L	A	D	E	L	L	A	K	G	I	Q	P	V	A	T	L	Y	H	W	D	L	P	Q	E	L	E	N	A	G	G	W	.	.	.	.
Template Known Secondary structure														T	T		S												S	G	G	G	S	S	S																			T	T									S	S			B						T	T		T	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.																								.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	D	K	N	H	P	S	V	V	M	W	S	I	A	N	E	P	D	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	G	A	R	E	Y	F	A	P	L
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																								.	.
Template Sequence		.	.	.	.	.	.	.	.	P	E	R	A	T	A	E	R	F	A	E	Y	A	A	I	A	A	D	A	L	G	D	R	.	.	V	K	T	W	T	T	L	N	E	P	W	C	S	A	F	L	G	Y	G	S	G	V	H	A	P	G	R	T	D	P	V	A	A	L	R	A	A	H	H	L	N	L	G	H	G	L	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	S	T																		T	T	T	.	.																			T	S		S	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																								.	.
Template SS confidence
										147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		429	430	.	.	.	.	.	.	.		.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure											.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	A	T	R	K	L	D	P	.	T	R	P	I	T	C	V	N	V	M	F	C	D	A	H	T	D	T	I	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation											.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	Q	A	L	R	D	R	L	P	A	D	A	Q	C	S	V	T	L	N	I	H	H	V	R	P	L	T	D	S	D	A	D	A	D	A	V	R	R	I	D	A	L	A	N	R	V	F	T	G	P	M	L	Q	G	A	Y	P	E	D	L	V	K	D	T	A	G	L	T	D	W	S	F	V	R	D	G	D	L	R	L
Template Known Secondary structure									S		T	T															S	S	S																T										S	S									T	T	T	T				T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
					459	460	.	.	.	.	.	.	.	.	.	470																							.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
Predicted Secondary structure		.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	L	F	D	V	L	C	L	N	R	Y	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	Y	V	Q	S	G	D	L	E	T	A	E	K	V	L	E	K	E	L	L	A	W	Q	E	K	L	H	Q	P	I	I	I	T	E	Y	G	V	D	T	L	A	G	L
Query Conservation		.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	H	Q	K	L	D	F	L	G	V	N	Y	Y	S	P	T	L	V	S	A	H	S	P	W	P	G	A	D	R	V	A	F	H	Q	P	P	G	E	T	T	A	M	G	W	A	V	D	P	S	G	L	Y	E	L	L	R	R	L	S	S	D	F	P	A	L	P	L	V	I	T	E	N	G	A	A	F	H	D	Y	A
Template Known Secondary structure							S							S										S	S	T	T		T	T							S	S		B		T	T			B																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		514	.	.	.	.	.	520	.	.	.	.			.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.						.	.	.	.	.	.	.	.	580	.	.	.	.	.	.
Predicted Secondary structure													.	.																																																.	.	.	.	.
Query SS confidence													.	.																																																.	.	.	.	.
Query Sequence		H	S	M	Y	T	D	M	W	S	E	E	.	.	Y	Q	C	A	W	L	D	M	Y	H	R	V	F	D	R	V	S	A	V	V	G	E	Q	V	W	N	F	A	D	F	A	T	S	Q	G	I	L	R	V	G	G	N	K	K	G	I	F	.	.	.	.	.	T	R	D	R	K	P	K	S	A	A	F	L	L	Q	K
Query Conservation													.	.																																																.	.	.	.	.
Alig confidence													.	.																														.	.	.																.	.	.	.	.
Template Conservation																																												.	.	.
Template Sequence		D	P	E	G	N	V	N	D	P	E	R	I	A	Y	V	R	D	H	L	A	A	V	H	R	A	I	K	D	G	S	D	V	R	G	Y	F	L	W	S	L	L	D	.	.	.	N	F	E	W	A	H	G	Y	S	K	R	F	G	A	V	Y	V	D	Y	P	T	G	T	R	I	P	K	A	S	A	R	W	Y	A	E
Template Known Secondary structure			T	T	S																								T	T											S	B		.	.	.				G	G	G	G	G	G					S					T	T	T	T
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.				.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
		587
Predicted Secondary structure
Query SS confidence
Query Sequence		R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		470

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions