Job Description P05804 Confidence 99.29% Date Thu Jan 5 10:58:55 GMT 2012 Rank 130 Aligned Residues 250 % Identity 14% Template d1ghsa_ SCOP info TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Resolution 2.30

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		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	G	R	H	E	D	A	D	L	R	G	K	G	F	D	N	V	L	M	V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	S	H	Y	P	Y	A	E	E	M	L	D	W	A	D	E	H	G	I	V	V	I	D	E	T	A	A	V	G	F	N	L	S	L	G	I	G	F	E	A	G	N	K	P
Query Conservation
Alig confidence													.	.	.							.	.	.															.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.							.	.	.															.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	C	Y	G	V	I	G	N	N	L	.	.	.	P	S	R	S	D	V	.	.	.	V	Q	L	Y	R	S	K	G	I	N	G	M	R	I	.	.	Y	F	A	D	G	Q	A	L	S	A	L	R	N	S	G	I	G	L	I	L	D	I	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S	S	S		.	.	.							.	.	.								T							.	.	S	S									T	T	T	S										G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.							.	.	.															.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.				.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.																					.
Query SS confidence																																																		.																					.
Query Sequence		K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	D	K	N	H	P	S	V	V	M	W	S	I	A	N	E	P	D	T	R	P	Q	.	G	A	R	E	Y	F	A	P	L	A	E	A	T	R	K	L	D	P	T	R	.	P	I	T	C	V	N	V	M	F	C
Query Conservation																																																		.																					.
Alig confidence		.	.	.	.																																													.																					.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	D	Q	L	A	N	I	A	A	S	T	S	N	A	A	S	W	V	Q	N	N	V	R	P	Y	Y	P	A	V	N	I	K	Y	I	A	A	G	N	E	V	Q	G	G	A	T	Q	S	I	L	P	A	M	R	N	L	N	A	A	L	S	A	A	G	L	G	A	I	K	V	S	T	S	I	R	F	D	E
Template Known Secondary structure		.	.	.	.	G	G																			T	T	T	T	T	T	T	S										S			G	G	G	G	G	G																T		T	T	S								G	G	G
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		450	.	.	.																		.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.																										.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	H	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	I	S	D	L	F	D	V	L	C	L	N	R	Y	Y	G	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	Q	S	G	D	L	E	T	A	E	K	V	L	E	K
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	N	S	F	P	P	S	A	G	V	F	K	N	A	Y	M	T	D	V	A	R	L	L	A	S	T	G	A	P	L	L	A	N	V	Y	P	Y	F	A	Y	R	D	N	P	G	S	I	S	L	N	Y	A	T	F	Q	P	G	T	T	V	R	D	Q	N	N	G	L	T	Y	T	S	L	F	D	A	M	V	D	A
Template Known Secondary structure						S	S	G	G	G				S	S	T													T																	T	T	T	S							T		T	T						T	T	T
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		488	.	490	.	.	.	.			.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.					540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.
Predicted Secondary structure									.	.																																														.	.	.	.
Query SS confidence									.	.																																														.	.	.	.
Query Sequence		E	L	L	A	W	Q	E	.	.	K	L	H	Q	P	I	I	I	T	E	Y	G	V	D	T	L	A	G	L	H	S	M	Y	T	D	M	W	S	E	E	Y	Q	C	A	W	L	D	M	Y	H	R	V	F	D	R	.	.	.	.	V	S	A	V	V	G	E	Q	V	W	N	F	A	D	F	A	T	S	Q	G	I	L
Query Conservation									.	.																																														.	.	.	.
Alig confidence									.	.																.	.	.	.	.	.																									.	.	.	.																						.
Template Conservation																										.	.	.	.	.	.																																																		.
Template Sequence		V	Y	A	A	L	E	K	A	G	A	P	A	V	K	V	V	V	S	E	S	G	W	P	S	.	.	.	.	.	.	A	G	G	F	A	A	S	A	G	N	A	R	T	Y	N	Q	G	L	I	N	H	V	G	G	G	T	P	K	K	R	E	A	L	E	T	Y	I	F	A	M	F	N	E	N	Q	K	T	G	D	.
Template Known Secondary structure										T		T	T												S	.	.	.	.	.	.	S	S	S	T	T															T	T	G	G	G			S	S			S									S	B			T	T			S	S	.
Template Predicted Secondary structure																										.	.	.	.	.	.																																																		.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.							.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	G	G	N	K	K	G	I	F	T	R	D	R	K	P	K
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	A	T	E	R	S	F	G	L	F	N	P	D	K	S	P	A
Template Known Secondary structure		.	G	G	G	G	G			S	B		T	T	S		B	S
Template Predicted Secondary structure		.
Template SS confidence
			286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions