Return to main results Retrieve Phyre Job Id

Job DescriptionP05804
Confidence99.94%DateThu Jan 5 10:58:55 GMT 2012
Rank33Aligned Residues266
% Identity17%Templated1egza_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  IRSVAVKGEQFLINHKPFYFTGFG. . RHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHYPYA. . . . . . . . . . . . . .
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Template Sequence  VEPLSVNGNKIYAGEKAKSFAGNSLFWSNNGWGGEKFYTADTVAS. . . LKKDWKSSIVRAAMGVQESGGYLQDPAGNKAK
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TTTT




TTSSGGGG
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   2.......10.........20.........30.........40...... ...50.........60.........70........
 
   335....340.........350.........360.........370.........380.........390.........400.........410...
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Query Sequence  . EEMLDWADEHGIVVIDETAAVGFNLSLGIGFEAGNKPKELYSEEAVNGETQQAHLQAIKELIARDKNHPSVVMWSIANE
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Template Sequence  VERVVDAAIANDMYAIIGWHSHSAEN. . . . . . . . . . . . . . . . . . . . . . . . NRSEAIRFFQEMARKYGNKPNVI. YEIYNE
Template Known Secondary structure  TT

S
GGG........................GTTSTT.

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   7980.........90.........100.... .....110.........120....... ..130...
 
   414 .....420.........430.........440.........450... ......460.........470.........480.......
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Query Sequence  P. . DTRPQGAREYFAPLAEATRKLDPTRPITCVNVMFCDAHT. . . . DTISDLFDVLCLNRYYGWYVQSGDLETAEKVLEK
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Template Sequence  PLQVSWSNTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQNVDEASRDPINAKNIAYTLHFYAGTHG. . . . . ESLRNKARQ
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S

TTTT
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   134.....140.........150.........160.........170.........180.........190......... 200........
 
   488.490.........500.........510.........520.........530.........540.........550.........560.......
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Query Sequence  ELLAWQEKLHQPIIITEYGVDTLAGLHSMYTDMWSEEYQCAWLDMYHRVFDRVSAVVGEQVWNFADFATSQGILRVGGNK
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Template Sequence  ALNN. . . . . GIALFVTEWGTVNADG. . . . . . . . . NGGVNQTETDAWVTFMRDNN. . ISNANWALNDKNEGAST. . . . . . .
Template Known Secondary structure  T.....T

SS
TTS.........
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   209210.. .......220........ .230.........240........ .250.........260.....
 
   568.570.........580.........590....
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Query Sequence  KGIFTRDRKPKSAAFLLQKRWTGMNFG
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Template Sequence  . . YYPDSKNLTESGKKVKSIIQSWPYK
Template Known Secondary structure  ..B
TTS

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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