Return to main results Retrieve Phyre Job Id

Job DescriptionP05804
Confidence56.72%DateThu Jan 5 10:58:55 GMT 2012
Rank274Aligned Residues50
% Identity8%Templated1e43a2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.7

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   309310.........320.........330.... .....340.........350...
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Query Sequence  VLMVHDHALMDWIGANSYRTSHYPYA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EEMLDWADEHGIVVIDETA
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Template Sequence  KRLQNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYGDVV
Template Known Secondary structure  T




SSSTT

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   21........30.........40.........50.........60.........70.........80.........90.........100
 
   354....
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Query Sequence  AVGFN
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Template Sequence  LNHKA
Template Known Secondary structure 
S
Template Predicted Secondary structure 




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   101....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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