Return to main results Retrieve Phyre Job Id

Job DescriptionP05804
Confidence54.94%DateThu Jan 5 10:58:55 GMT 2012
Rank276Aligned Residues91
% Identity22%Templated1cxla4
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.81

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   307..310...... ...320........ .330.... .....340........
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Query Sequence  DNVLMVHDHA. . LMDWIGANSYRT. . . . . . . . . . . . . . . . . . . . . SHYPYA. . . . . . . . . . . . . . . EEMLDWADEHGIVV
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Template Sequence  DWQGIINKINDGYLTGMGVTAIWISQPVENIYSIINYSGVNNTAYHGYWARDFKKTNPAYGTIADFQNLIAAAHAKNIKV
Template Known Secondary structure 
TTTTGGGT








TT
STTS
S
TTT

TT
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   53......60.........70.........80.........90.........100.........110.........120.........130..
 
   349350.. .......360.........370.........380.........
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Query Sequence  IDET. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AAVGFNLSLGIGFEAGNKPKELYSEEAVNGETQQAHL
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Template Sequence  IIDFAPNHTSPASSDQPSFAENGRLYDNGTLLGGYTNDTQNLFHHNGGTDFSTTENGIYKNLYDLADLNHNNSTVDVYLK
Template Known Secondary structure 
TT

TT
TTSTTTT
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STT
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B

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SSSSBSTTB
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   133......140.........150.........160.........170.........180.........190.........200.........210..
 
   390.......
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Query Sequence  QAIKELIA
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Template Sequence  DAIKMWLD
Template Known Secondary structure 
Template Predicted Secondary structure 
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   213......220
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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