Job Description P05804 Confidence 23.19% Date Thu Jan 5 10:58:55 GMT 2012 Rank 364 Aligned Residues 126 % Identity 17% Template d1cgta4 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 2.00

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		307	.	.	310	.	.	.	.	.			.	.	.	.	320	.	.	.	.	.	.	.	.																						.	330	.	.	.	.																.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	N	V	L	M	V	H	D	H	.	.	A	L	M	D	W	I	G	A	N	S	Y	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	Y	P	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	M	L	D	W	A	D	E	H	G	I	V	V
Query Conservation											.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	W	Q	G	L	I	N	K	I	N	D	N	Y	F	S	D	L	G	V	T	A	L	W	I	S	Q	P	V	E	N	I	F	A	T	I	N	Y	S	G	V	T	N	T	A	Y	H	G	Y	W	A	R	D	F	K	K	T	N	P	Y	F	G	T	M	A	D	F	Q	N	L	I	T	T	A	H	A	K	G	I	K	I
Template Known Secondary structure												T	T						T															S					T	T						T	T	S		S									T	T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.																																								.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	D	E	T	A	A	V	G	F	N	L	S	L	G	I	G	F	E	A	G	N	K	P	K	E	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	D	F	A	P	N	H	T	S	P	A	M	E	T	D	T	S	F	A	E	N	G	R	L	Y	D	N	G	T	L	V	G	G	Y	T	N	D	T	N	G	Y	F	H	H	N	G	G	S	D	F	S	S	L	E	N	G	I	Y	K	N	L	Y	D	L	A	D	F	N	H	N	N	A	T	I	D	K	Y	F	K
Template Known Secondary structure							T	T							T	T		T	T	S	T	T	T	T					T	T						S	T	T		T	T			B			S		B				S	S							S	B	B	T	T				B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	I	K	E	L	I	A	R	D	K	N	H	P	S	V	V	M	W	S	I	A	N	E	P	D	T	R	P	Q	G	A	R	E	Y	F	A	P	L	A	E	A	T	R	K	L	D	P	T	R	P	I
Query Conservation
Alig confidence										.	.	.																.	.	.	.	.	.
Template Conservation										.	.	.																.	.	.	.	.	.
Template Sequence		D	A	I	K	L	W	L	D	.	.	.	M	G	V	D	G	I	R	V	D	A	V	K	H	M	P	.	.	.	.	.	.	L	G	W	Q	K	S	W	M	S	S	I	Y	A	H	K	P	V	F	T	F
Template Known Secondary structure										.	.	.	T	T							S		G	G	G	S		.	.	.	.	.	.															S
Template Predicted Secondary structure										.	.	.																.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230	.	.	.	.	.							.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions