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Job DescriptionP05804
Confidence99.23%DateThu Jan 5 10:58:55 GMT 2012
Rank139Aligned Residues263
% Identity19%Templated1cbga_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Family 1 of glycosyl hydrolase
Resolution2.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   309310.........320......... 330.... .....340.........350.........360.........
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Query Sequence  VLMVHDHALMDWIGANSYRTS. . . . . HYPYA. . . . . . . . . . . . . . EEMLDWADEHGIVVIDETAAVGFNLSLGIGFEAGN
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Template Sequence  HRYKEDIGIMKDMNLDAYRFSISWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFHWDVPQALEDEYRG. .
Template Known Secondary structure  TT



STTSSGGG


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   73......80.........90.........100.........110.........120.........130.........140.........150
 
   370.........380.........390.........400.........410.........420..
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Query Sequence  KPKELYSEEAVNGETQQAHLQAIKELIARDKNHPSVVMWSIANEPDTRPQGAR. . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . . . . . . . . . FLGRNIVDDFRDYAELCFKEFGDRVK. . HWITLNEPWGVSMNAYAYGTFAPGRCSDWLKLNCTGGDSGREP
Template Known Secondary structure  .........GGSTTTTT

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TS

STT



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TTT
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   151........160.........170...... ...180.........190.........200.........210.........
 
   423......430.........440.........450......
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Query Sequence  . . . . . . . . . . . EYFAPLAEATRKLDPTRPITCVNVMFCDAHTDTI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  YLAAHYQLLAHAAAARLYKTKYQASQNGIIGITLVSHWFEPASKEKADVDAAKRGLDFMLGWFMHPLTKGRYPESMRYLV
Template Known Secondary structure  T



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   220.........230.........240.........250.........260.........270.........280.........290.........
 
   457..460.........470. ........480.......
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Query Sequence  . . . . . . . . . . . . . . . SDLFDVLCLNRYYGW. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YVQSGDLETAEKVLEK
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Template Sequence  RKRLPKFSTEESKELTGSFDFLGLNYYSSYYAAKAPRIPNARPAIQTDSLINATFEHNGKPLGPMAASSWLCIYPQGIRK
Template Known Secondary structure  GGGS



TT

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T
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   300.........310.........320.........330.........340.........350.........360.........370.........
 
   488.490......... 500.........510.........520.........530.........540 .........550.........560..
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Query Sequence  ELLAWQEKLHQP. IIITEYGVDTLAGLHSMYTDMWSEEYQCAWLDMYHRVFDRV. . . . SAVVGEQVWNFADFATSQGILR
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Template Sequence  LLLYVKNHYNNPVIYITENGRNEFNDPTLSLQESLLDTPRIDYYYRHLYYVLTAIGDGVNVKGYFAWSLFD. . . NMEWDS
Template Known Secondary structure  TT








TTS


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   380.........390.........400.........410.........420.........430.........440.........450 ......
 
   563......570. ........580.......
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Query Sequence  VGGNKKGIF. . . . . . TRDRKPKSAAFLLQKR
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Template Sequence  GYTVRFGLVFVDFKNNLKRHPKLSAHWFKSF
Template Known Secondary structure  TTS

STTTTT
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   457..460.........470.........480.......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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