Job Description P05804 Confidence 99.92% Date Thu Jan 5 10:58:55 GMT 2012 Rank 39 Aligned Residues 231 % Identity 20% Template d1bqca_ SCOP info TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Resolution 1.50

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		269	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.											.	330	.	.	.	.	.	.	.
Predicted Secondary structure																.																																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																.																																															.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	I	R	S	V	A	V	K	G	E	Q	F	L	.	I	N	H	K	P	F	Y	F	T	G	F	G	R	H	E	D	A	D	L	R	G	K	G	F	D	N	V	L	M	V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	.	.	.	.	.	.	.	.	.	.	S	H	Y	P	Y	A	E	E	M
Query Conservation																.																																															.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.								.																							.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.																															.	.	.	.	.	.	.	.
Template Sequence		T	G	L	H	.	.	.	V	K	N	G	R	L	Y	E	A	N	G	Q	E	F	I	I	R	G	V	S	H	P	H	N	W	Y	P	Q	H	T	.	.	.	.	.	.	.	.	Q	A	F	A	D	I	K	S	H	G	A	N	T	V	R	V	V	L	S	N	G	V	R	W	S	K	N	G	P	S	D	V	A	N	V
Template Known Secondary structure				S		.	.	.			T	T					T	T	S		B										T	T	T		T	T		T	.	.	.	.	.	.	.	.	T								T	T		S									S	S	S	S
Template Predicted Secondary structure						.	.	.																															.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.				.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.									.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	W	A	D	E	H	G	I	V	V	I	D	E	T	A	A	V	G	F	N	L	S	L	G	I	G	F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	D	K	N	H	P	S	V	V	M	W	S	I	A	N	E	P	D	T	R
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	L	C	K	Q	N	R	L	I	C	M	L	E	V	H	D	T	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	E	Q	S	G	A	S	T	L	D	Q	A	V	D	Y	W	I	E	L	K	S	V	L	Q	G	E	E	D	Y	V	L	I	N	I	G	N	E	P	Y	G	N
Template Known Secondary structure								T	T								G	G	G	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	S	T	T														T					T	T		T	T	T						S	S	S				S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90																			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
						418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.												.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure		.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	P	Q	G	A	R	E	Y	F	A	P	L	A	E	A	T	R	K	L	D	P	T	R	P	I	T	C	V	N	V	M	F	C	D	A	H	T	D	T	I	S	D	L	F	D	.	.	.	.	.	.	.	.	.	.	.	V	L	C	L	N	R	Y	Y	G	W	Y	V	Q	S	G	D	L	E	T	A	E
Query Conservation		.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	S	A	T	V	A	A	W	A	T	D	T	S	A	A	I	Q	R	L	R	A	A	G	F	E	H	T	L	V	V	D	A	P	N	W	G	Q	D	W	T	N	T	M	R	N	N	A	D	Q	V	Y	A	S	D	P	T	G	N	T	V	F	S	I	H	M	Y	G	V	Y	S	Q	A	S	T	I	T	S	Y	L	E
Template Known Secondary structure							T	T															T	T			S							T	T	T	T	T		T	T													T		T	T										S	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	L	E	K	E	L	L	A	W	Q	E	K	L	H	Q	P	I	I	I	T	E	Y	G	V	D	T	L	A	G	L	H	S	M	Y	T	D	M	W	S	E	E	Y	Q	C	A	W	L	D	M	Y	H	R	V	F	D	R	V	S	A	V	V	G	E	Q	V	W	N	F	A	D
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation							.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Sequence		H	F	V	N	A	.	.	.	.	.	.	.	.	.	G	L	P	L	I	I	G	E	F	G	H	D	H	S	D	G	N	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	T	I	M	A	E	A	E	R	L	K	.	.	L	G	Y	I	G	W	S	W	S	G
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	T											T	T	S	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	.	.						S		S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template SS confidence
		213	.	.	.	.										.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.															.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions