Job Description P05804 Confidence 99.47% Date Thu Jan 5 10:58:55 GMT 2012 Rank 107 Aligned Residues 220 % Identity 15% Template c3u7vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-galactosidase; PDBTitle: the structure of a putative beta-galactosidase from caulobacter2 crescentus cb15. Resolution 1.80 Å

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		273	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.														.	.	.
Predicted Secondary structure										.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	A	V	K	G	E	Q	.	.	F	L	I	N	H	K	P	F	Y	F	T	G	F	G	R	H	E	D	A	D	L	R	G	K	G	F	D	N	V	L	M	V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	S	H	Y	P	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	M
Query Conservation										.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.																			.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.
Template Sequence		Q	L	V	T	K	D	G	R	H	A	L	X	V	D	G	A	P	F	L	X	L	A	A	Q	V	N	N	S	.	.	.	.	.	.	S	A	W	P	S	Q	X	A	K	V	W	P	A	I	E	K	V	G	A	N	T	V	Q	V	P	I	A	W	E	Q	I	E	P	V	E	G	Q	F	D	F	S	Y	L	D	L	L
Template Known Secondary structure							T	T							T	T												T	T	.	.	.	.	.	.			S	G	G	G												T		S													S	B	T	T	B
Template Predicted Secondary structure																														.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.							.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.													.	.	.	.					.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Query Sequence		L	D	W	A	D	E	H	G	I	V	V	I	D	E	.	.	.	.	.	.	.	.	.	.	.	.	T	A	A	V	.	.	.	.	G	F	N	L	S	L	G	I	G	F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	D	K	N
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Template Conservation
Template Sequence		L	E	Q	A	R	E	R	K	V	R	L	V	L	L	W	F	G	T	W	K	N	S	S	P	S	Y	A	P	E	W	V	K	L	D	D	K	R	F	P	R	L	I	K	D	D	G	E	R	S	Y	S	X	S	P	L	A	K	S	T	L	D	A	D	R	K	A	F	V	A	L	X	T	H	L	K	A	K	D	A	A
Template Known Secondary structure								T	T													T	T	B		T	T	S						T		T	T	T	S						T	T	S								T	T																								T	T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.																																															.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	P	S	V	V	M	W	S	I	A	N	E	P	D	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	G	A	R	E	Y	F	A	P	L	A	E	A	T	R	K	L
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	K	T	V	I	X	V	Q	V	E	N	E	T	G	T	Y	G	S	V	R	D	F	G	P	A	A	Q	K	V	F	N	G	P	A	P	A	T	L	V	K	A	V	G	A	K	P	G	T	W	S	Q	A	F	G	K	D	A	D	E	F	F	H	A	W	H	I	G	R	F	V	D	Q	V	A	A	G	G	K	A	V
Template Known Secondary structure		T											S		S	B	S	S		S	S			S									S	B										T			S	S	B						G	G	G																							T	T
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.																			.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	P	T	R	P	I	T	C	V	N	V	M	F	C	D	A	H	T	D	T	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	F	D	V	L	C	L	N	R	Y	Y	G	W	Y	V	Q	S	G	D	L	E	T	A	E	K	V	L	E	K	E	L	L	A	W	Q	E	K	L	H
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.															.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.															.	.	.	.	.
Template Sequence		Y	P	L	P	X	Y	V	N	A	A	L	R	D	P	I	K	P	G	D	P	K	T	Y	S	A	G	G	P	T	D	N	V	I	G	V	W	Q	A	A	A	P	S	I	D	L	I	A	P	D	I	Y	X	.	.	.	.	.	.	K	E	S	V	K	Y	E	A	V	L	G	H	Y	A	.	.	.	.	.	R	P	N
Template Known Secondary structure															S	S	S				G	G	G	S		B	T	S			G	G	G									T	T											.	.	.	.	.	.															.	.	.	.	.	B	T	T
Template Predicted Secondary structure																																																						.	.	.	.	.	.															.	.	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.							.	.	.	.	.	.	330	.	.	.	.	.	.	.						.	.	340
		498	.	500	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	I	I	I	T	E	Y	G	V	D	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	L	F	V	A	E	T	G	N	D	P
Template Known Secondary structure		B										S	G
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions