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Job DescriptionP05804
Confidence99.54%DateThu Jan 5 10:58:55 GMT 2012
Rank103Aligned Residues262
% Identity19%Templatec3qomA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:6-phospho-beta-glucosidase; PDBTitle: crystal structure of 6-phospho-beta-glucosidase from lactobacillus2 plantarum
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   309310.........320.........330.... .....340.........350.........360.........370
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Query Sequence  VLMVHDHALMDWIGANSYRTSHYPYA. . . . . . . . . . . . . . . . . . EEMLDWADEHGIVVIDETAAVGFNLSLGIGFEAGNK
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Template Sequence  HRYPEDIELFAEXGFKCFRTSIAWTRIFPNGDESEPNEAGLQFYDDLFDECLKNGIQPVVTLAHFEXPYHLVKQYGG. . .
Template Known Secondary structure  T
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SSSS

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TT
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B
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   71........80.........90.........100.........110.........120.........130.........140.......
 
   371........380.........390.........400.........410.........420
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Query Sequence  PKELYSEEAVNGETQQAHLQAIKELIARDKNHPSVVMWSIANEPDTRPQG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . . . . . . . . WRNRKLIQFYLNFAKVCFERYRDK. . VTYWXTFNEINNQTNFESDGAXLTDSGIIHQPGENRERWXYQAAHY
Template Known Secondary structure  ........GGSTTTTT..

TTGGGGGSTT





TT

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   148.150.........160.........170. ........180.........190.........200.........210.......
 
   421........430.........440.........450......
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Query Sequence  AREYFAPLAEATRKLDPTRPITCVNVMFCDAHTDTI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  ELVASAAAVQLGHQINPDFQIGCXIAXCPIYPLTAAPADVLFAQRAXQTRFYFADVHCNGTYPQWLRNRFESEHFNLDIT
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TT



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   218.220.........230.........240.........250.........260.........270.........280.........290.......
 
   457..460........ .470.........480.........490.........500......
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Query Sequence  . . . . . . . . SDLFDVLCLNRY. . . . . . . . . . . . . . . . . . . . . . YGWYVQSGDLETAEKVLEKELLAWQEKLHQPIIITEYG
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Template Sequence  AEDLKILQAGTVDYIGFSYYXSFTVKDTGKLAYNEEHDLVKNPYVKASDWGWQVDPVGLRYAXNWFTDRYHLPLFIVENG
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SS




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TTS
B
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B

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   298.300.........310.........320.........330.........340.........350.........360.........370.......
 
   507..510.........520.........530.........540 . ........550.........560.... .....570.
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Query Sequence  VDTLAGLHSMYTDMWSEEYQCAWLDMYHRVFDRV. S. . . AVVGEQVWNFADFATSQGILRVG. GNKKGIF. . . . . . . . . .
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Template Sequence  LGAIDKK. TADNQIHDDYRIDYLTDHLRQIKLAVLEDGVDLIGYTPWGCID. . . LVAASTGQXSKRYGFIYVDENDDGSG
Template Known Secondary structure 

B


B.
TTS
B

TT




BTSB
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TTT

SSSB

S


TTS
S
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   378.380.... .....390.........400.........410.........420....... ..430.........440.........450...
 
   572.......580.......
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Query Sequence  TRDRKPKSAAFLLQKR
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Template Sequence  SLKRYKKDSFTWFQHV
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   454.....460.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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