Job Description P05804 Confidence 62.71% Date Thu Jan 5 10:58:55 GMT 2012 Rank 255 Aligned Residues 44 % Identity 11% Template c3oggA_ PDB info PDB header:toxin Chain: A: PDB Molecule:botulinum neurotoxin type d; PDBTitle: crystal structure of the receptor binding domain of botulinum2 neurotoxin d Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	V	L	R	F	D	A	V	T	H	Y	G	K	V	W	V	N	N	Q	E	V	M	E	H	Q	G	G	Y	T	P	F	E	A	D	V	T	P	Y	V	I	A	G	K	S	V	R	I	T	V	C	V	N	N
Query Conservation
Alig confidence													.												.	.	.	.	.	.	.	.	.
Template Conservation													.												.	.	.	.	.	.	.	.	.
Template Sequence		F	V	T	I	T	N	N	I	M	G	Y	.	M	K	L	Y	I	N	G	E	L	K	Q	.	.	.	.	.	.	.	.	.	S	Q	K	I	E	D	L	D	E	V	K	L	D	K	T	I	V	F	G	I	D	E
Template Known Secondary structure									T	T	S		.						T	T					.	.	.	.	.	.	.	.	.					T	T	S				B								S			S
Template Predicted Secondary structure													.												.	.	.	.	.	.	.	.	.
Template SS confidence
		1004	.	.	.	.	.	1010	.	.	.	.		.	.	.	.	.	1020	.	.	.	.	.										.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions