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Job DescriptionP05804
Confidence100.00%DateThu Jan 5 10:58:55 GMT 2012
Rank1Aligned Residues600
% Identity98%Templatec3lpgA_
PDB info PDB header:hydrolase/hydrolase inhibitorChain: A: PDB Molecule:beta-glucuronidase; PDBTitle: structure of e. coli beta-glucuronidase bound with a novel, potent2 inhibitor 3-(2-fluorophenyl)-1-(2-hydroxyethyl)-1-((6-methyl-2-oxo-1,3 2-dihydroquinolin-3-yl)methyl)urea
Resolution2.42 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  LRPVETPTREIKKLDGLWAFSLDRENCGIDQRWWESALQESRAIAVPGSFNDQFADADIRNYAGNVWYQREVFIPKGWAG
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Template Sequence  LRPVETPTREIKKLDGLWAFSLDRENCGIDQRWWESALQESRAIAVPGSFNDQFADADIRNYAGNVWYQREVFIPKGWAG
Template Known Secondary structure 



SSS





SSS

TTTTTGGGS

TT
SSS
SSGGGT
T

S

GGGTT
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  QRIVLRFDAVTHYGKVWVNNQEVMEHQGGYTPFEADVTPYVIAGKSVRITVCVNNELNWQTIPPGMVITDENGKKKQSYF
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Template Conservation      
 
 

   
 
 


  

           


  
  
  
 
 
 
                           
Template Sequence  QRIVLRFDAVTHYGKVWVNNQEVXEHQGGYTPFEADVTPYVIAGKSVRITVCVNNELNWQTIPPGXVITDENGKKKQSYF
Template Known Secondary structure  SS

SSSS


SSS

GGG

TTS



TTSSS

TT

S
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  HDFFNYAGIHRSVMLYTTPNTWVDDITVVTHVAQDCNHASVDWQVVANGDVSVELRDADQQVVATGQGTSGTLQVVNPHL
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Template Conservation         

 
 
 
       
    
            
                                 
    
Template Sequence  HDFFNYAGIHRSVXLYTTPNTWVDDITVVTHVAQDCNHASVDWQVVANGDVSVELRDADQQVVATGQGTSGTLQVVNPHL
Template Known Secondary structure  SSB



S

S

SS

SSSS


SS
TT

SSS






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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
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Query Sequence  WQPGEGYLYELCVTAKSQTECDIYPLRVGIRSVAVKGEQFLINHKPFYFTGFGRHEDADLRGKGFDNVLMVHDHALMDWI
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Template Conservation 
 
  
 

        
   
      


          


 
  


          
           
   
  
Template Sequence  WQPGEGYLYELCVTAKSQTECDIYPLRVGIRSVAVKGEQFLINHKPFYFTGFGRHEDADLRGKGFDNVLXVHDHALXDWI
Template Known Secondary structure 

TTT



SS




TTTT



S
BTTTBT


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   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   322.......330.........340.........350.........360.........370.........380.........390.........400.
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Query Sequence  GANSYRTSHYPYAEEMLDWADEHGIVVIDETAAVGFNLSLGIGFEAGNKPKELYSEEAVNGETQQAHLQAIKELIARDKN
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Template Conservation 
 
 

           
 


 



  
                             
              
 
 

Template Sequence  GANSYRTSHYPYAEEXLDWADEHGIVVIDETAAVGFNLSLGIGFEAGNKPKELYSEEAVNGETQQAHLQAIKELIARDKN
Template Known Secondary structure  T


TTS


T

S
B


S



SSS




S
SSBTTTB
TT
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   322.......330.........340.........350.........360.........370.........380.........390.........400.
 
   402.......410.........420.........430.........440.........450.........460.........470.........480.
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Query Sequence  HPSVVMWSIANEPDTRPQGAREYFAPLAEATRKLDPTRPITCVNVMFCDAHTDTISDLFDVLCLNRYYGWYVQSGDLETA
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Template Conservation 




 
   

                  

  



 
   
               

     
 
           
Template Sequence  HPSVVXWSIANEPDTRPQGAREYFAPLAEATRKLDPTRPITCVNVXFCDAHTDTISDLFDVLCLNRYYGWYVQSGDLETA
Template Known Secondary structure 
TT




ST
SSS
B
TTS
TTT
SSGGGSSS

BTTTBSTT
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   402.......410.........420.........430.........440.........450.........460.........470.........480.
 
   482.......490.........500.........510.........520.........530.........540.........550.........560.
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Query Sequence  EKVLEKELLAWQEKLHQPIIITEYGVDTLAGLHSMYTDMWSEEYQCAWLDMYHRVFDRVSAVVGEQVWNFADFATSQGIL
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Template Conservation                   
 
 

 
               

  

                 
   
   
        
Template Sequence  EKVLEKELLAWQEKLHQPIIITEYGVDTLAGLHSXYTDXWSEEYQCAWLDXYHRVFDRVSAVVGEQVWNFADFATSQGIL
Template Known Secondary structure 








TT


TT

TTSTT
TTS
B
B

BTT
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   482.......490.........500.........510.........520.........530.........540.........550.........560.
 
   562.......570.........580.........590.........600.
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Query Sequence  RVGGNKKGIFTRDRKPKSAAFLLQKRWTGMNFGEKPQQGG
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Template Sequence  RVGGNKKGIFTRDRKPKSAAFLLQKRWTGXNFGEKPQQGG
Template Known Secondary structure  BSSSB


TT

B
TS
TT



S

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   562.......570.........580.........590.........600.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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