Job Description P05804 Confidence 99.39% Date Thu Jan 5 10:58:55 GMT 2012 Rank 116 Aligned Residues 210 % Identity 18% Template c3kzsD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:glycosyl hydrolase family 5; PDBTitle: crystal structure of glycosyl hydrolase family 5 (np_809925.1) from2 bacteroides thetaiotaomicron vpi-5482 at 2.10 a resolution Resolution 2.10 Å

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		270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	R	S	V	A	V	K	G	E	Q	F	L	I	.	N	H	K	P	F	Y	F	T	G	F	G	R	H	E	D	A	D	L	R	G	K	G	F	D	N	V	L	M	V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	S	H	Y	P	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.																				.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.
Template Sequence		G	K	L	V	V	S	E	E	G	R	Y	L	K	H	E	N	G	T	P	F	F	W	L	G	E	T	G	W	L	L	P	E	R	L	.	.	.	.	N	R	D	E	A	E	Y	Y	L	E	Q	C	K	R	R	G	Y	N	V	I	Q	V	Q	T	L	N	N	V	P	S	X	N	I	Y	G	Q	Y	S	X	T	D	G
Template Known Secondary structure			S					T	T	S	S	S				T	T	S		B									T	T						.	.	.	.														T	T	T								S		S	S	S	S		B		T	T			B	S		S	S	T
Template Predicted Secondary structure																																				.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
																				335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	M	L	D	W	A	D	E	H	G	I	V	V	I	D	E	T	A	A	V	G	F	N	L	S	L	G	I	G	F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	N	F	K	N	I	N	Q	K	G	V	Y	G	Y	W	D	H	X	D	Y	I	I	R	T	A	A	K	K	G	L	Y	I	G	X	.	V	C	I	W	G	S	P	V	S	H	G	E	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	D	Q	A	K	A	Y	G	K	F	L	A
Template Known Secondary structure		T			T	T				T	T																		T	T						.			S							T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.																				.	160	.	.	.	.	.	.	.	.	.	170	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.					.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		A	R	D	K	N	H	P	S	V	V	M	W	S	I	A	N	E	P	D	T	R	P	Q	G	A	R	E	Y	F	A	P	L	A	E	A	T	R	K	L	D	P	T	R	P	I	T	C	V	N	V	M	F	C	D	A	.	.	.	.	H	T	D	T	I	S	D	L	F	D	V	L	C	L	N	R	Y	Y	G	W	Y
Query Conservation																																																									.	.	.	.
Alig confidence												.														.	.																														.	.	.	.
Template Conservation												.														.	.
Template Sequence		E	R	Y	K	D	E	P	N	I	I	.	W	F	I	G	G	D	I	R	G	D	V	K	T	.	.	A	E	W	E	A	L	A	T	S	I	K	A	I	D	K	N	H	L	X	T	F	H	P	R	G	R	T	T	S	A	T	W	F	N	N	A	P	W	L	D	F	N	X	F	Q	S	G	H	R	R	Y	G	Q	R
Template Known Secondary structure					T	T		S	S			.					S	S			T	T	S	S		.	.																S	S								B	T		B	T					T	T		T	T			B				B			S			T	T
Template Predicted Secondary structure												.														.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		473	.	.	.	.	.	.	480	.	.	.	.					.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		V	Q	S	G	D	L	E	T	A	E	K	V	.	.	.	.	L	E	K	E	L	L	A	W	Q	E	K	L	H	Q	P	I	I	I	T	E	Y	G
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.
Template Conservation
Template Sequence		F	G	D	G	D	Y	P	I	E	E	N	T	E	E	D	N	W	R	F	V	E	R	S	X	A	X	K	P	X	K	P	V	I	D	G	E	P	I
Template Known Secondary structure		S	S	S	S			S	S		T	T		T	T		T									T	S	S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions