Job Description P05804 Confidence 98.04% Date Thu Jan 5 10:58:55 GMT 2012 Rank 153 Aligned Residues 237 % Identity 15% Template c3gtnA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:glucuronoxylanase xync; PDBTitle: crystal structure of xync from bacillus subtilis 168 Resolution 2.68 Å

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		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.							.	.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																			.	.	.	.	.	.															.	.
Query SS confidence																			.	.	.	.	.	.															.	.
Query Sequence		I	G	A	N	S	Y	R	T	S	H	Y	P	Y	A	E	E	M	.	.	.	.	.	.	L	D	W	A	D	E	H	G	I	V	V	I	D	E	.	.	T	A	A	V	G	F	N	L	S	L	G	I	G	F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I
Query Conservation																			.	.	.	.	.	.															.	.
Alig confidence																			.	.	.	.	.	.															.	.																					.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.
Template Sequence		L	G	F	S	I	L	R	I	H	V	D	E	N	R	N	N	W	Y	K	E	V	E	T	A	K	S	A	V	K	H	G	A	I	V	F	A	S	P	W	N	P	P	S	D	M	V	E	T	F	N	R	N	G	D	T	S	A	K	R	.	.	.	.	.	.	.	.	L	K	Y	N	K	Y	A	A	Y	A	Q	H	L
Template Known Secondary structure													S	S	T	T	S	G	G	G	G										T	T								S	S			G	G	G						S	S	S		T	T				.	.	.	.	.	.	.	.			G	G	G
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.									.	.	.	.	110	.	.	.	.	.	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.			.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.				.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.							460	.
Predicted Secondary structure																					.	.																											.	.	.																							.	.	.	.	.	.
Query SS confidence																					.	.																											.	.	.																							.	.	.	.	.	.
Query Sequence		K	E	L	I	A	R	D	K	N	H	P	S	V	V	M	W	S	I	A	.	.	N	E	P	D	T	R	P	Q	G	A	R	E	Y	F	A	P	L	A	E	A	T	R	K	L	D	P	.	.	.	T	R	P	I	T	C	V	N	V	M	F	C	D	A	H	T	D	T	I	S	D	L	.	.	.	.	.	.	F	D
Query Conservation																					.	.																											.	.	.																							.	.	.	.	.	.
Alig confidence												.									.	.																											.	.	.																							.	.	.	.	.	.
Template Conservation												.
Template Sequence		N	D	F	V	T	F	M	K	N	N	.	G	V	N	L	Y	A	I	S	V	Q	N	E	P	D	Y	A	H	E	W	T	W	W	T	P	Q	E	I	L	R	F	M	R	E	N	A	G	S	I	N	A	R	V	I	A	P	E	S	F	Q	Y	L	K	N	L	S	D	P	I	L	N	D	P	Q	A	L	A	N	M	D
Template Known Secondary structure											T	.	T				S				S		S	S	T	T	S		T	T	S		B													T	T	T	T		S	S								T	T			G	G	G	T					T									S
Template Predicted Secondary structure												.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	C	L	N	R	Y	Y	G	W	Y	V	Q	S	G	D	L	E	T	A	E	K	V	L	E	K	E	L	L	A	W	Q	E	K	L	H	Q	P	I	I	I	T	E	Y	G	V	D	T	L	A	G	L	H	S	M	Y	T	D	M	W	S	E	E	Y	Q	C	A	W	L	D	M	Y	H	R	V	F	D	R	V	S
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Template Sequence		I	L	G	T	H	L	Y	G	T	Q	V	S	Q	F	P	Y	P	L	F	K	Q	K	.	.	.	.	.	.	.	.	.	.	.	G	A	G	K	D	L	W	M	T	E	V	Y	Y	P	N	S	D	T	N	S	A	D	R	W	P	E	A	.	.	.	.	.	.	L	D	V	S	Q	H	I	H	N	A	M	V	E	G
Template Known Secondary structure								T	T			G	G	G	S									.	.	.	.	.	.	.	.	.	.	.		T	T											S				T	T		T	T		T	T	T	T	.	.	.	.	.	.													T	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.												220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.							.	.	.	250	.	.	.	.	.	.	.	.	.	260
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	V	G	E	Q	V	W	N	F	A	D	F	A	T	S	Q	G	I	L	R	V	G	G	N	K	K	G	I	F	T	R	D	R	K	P	K	S	A	A	F	L	L	Q	K	R	W	T	G	M	N	F	G	E	K
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	F	Q	A	Y	V	W	W	Y	I	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	G	P	M	K	E	D	G	T	I	S	K	R	G	Y	N	M	A	H	F	S	K	F	V	R	P	G	Y	V
Template Known Secondary structure				S							S	B	S	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S	B		T	T	S		B												T	T	S		T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.														.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions