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Job DescriptionP05804
Confidence99.30%DateThu Jan 5 10:58:55 GMT 2012
Rank128Aligned Residues248
% Identity14%Templatec3f55A_
PDB info PDB header:hydrolase, allergenChain: A: PDB Molecule:beta-1,3-glucanase; PDBTitle: crystal structure of the native endo beta-1,3-glucanase (hev b 2), a2 major allergen from hevea brasiliensis (space group p41)
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   292.......300.........310.........320.........330.........340.........350.........360.........370.
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Query Sequence  GFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHYPYAEEMLDWADEHGIVVIDETAAVGFNLSLGIGFEAGNKP
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Template Sequence  GVCYGMQGNNL. . . PPVSEV. . . IALYKKSNITRMRI. . YDPNQAVLEALRGSNIELILGVP. . . . . . . . . . . . . . . . . .
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   3......10... ...... 20.........30... ......40.........50......
 
   372.......380.........390.........400.........410.........420.........430..... ....440..
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Query Sequence  KELYSEEAVNGETQQAHLQAIKELIARDKNHPSVVMWSIANEPDTRPQGAREYFAPLAEATRKL. . . . . . . . . DPTRPIT
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Template Sequence  . . . . NSDLQSLTNPSNAKSWVQKNVRGFWSSVRFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAIRSAGLQDQIKVS
Template Known Secondary structure  ....TTTTTGGGSTTTTTTTTTS

SSSTTTTTTT
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   57..60.........70.........80.........90.........100.........110.........120.........130..
 
   443......450..... ....460.........470. .......
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Query Sequence  CVNVMFCDAHTDT. . . . . . . . . . . . . . . . . . . . ISDLFDVLCLNRYYGW. . . . . . . . . . . . . . . . . . . . . . . . YVQSGDL
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Template Sequence  TAIDLTLVGNSYPPSAGAFRDDVRSYLNPIIRFLSSIRSPLLANIYPYFTYAGNPRDISLPYALFTSPSVVVWDGQRGYK
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SSGGG

GGGTT




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   133......140.........150.........160.........170.........180.........190.........200.........210..
 
   479480.........490.... .....500.........510.........520.........530......... 540.........550.
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Query Sequence  ETAEKVLEKELLAWQE. . KLHQPIIITEYGVDTLAGLHSMYTDMWSEEYQCAWLDMYHRVFDR. . . . . VSAVVGEQVWNF
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Template Sequence  NLFDATLDALYSALERASGGSLEVVVSESGWPSA. . . . . . GAFAATFDNGRTYLSNLIQHVKRGTPKRPKRAIETYLFAM
Template Known Secondary structure  STTT
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   213......220.........230.........240...... ...250.........260.........270.........280......
 
   552.......560.........570........
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Query Sequence  ADFATSQGILRVGGNKKGIFTRDRKPK
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Template Sequence  FDENKK. . . QPEVEKHFGLFFPNKWQK
Template Known Secondary structure  B

TTS...SSGGGG


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   287..290.. .......300.........310
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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