Job Description P05804 Confidence 78.36% Date Thu Jan 5 10:58:55 GMT 2012 Rank 212 Aligned Residues 110 % Identity 15% Template c3eypB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative alpha-l-fucosidase; PDBTitle: crystal structure of putative alpha-l-fucosidase from bacteroides2 thetaiotaomicron Resolution 1.90 Å

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		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.				.	330	.	.	.	.																									.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure																			.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	.	.	.	S	H	Y	P	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	M	L	D	W	A	D	E	H	G	I	V	V	I	D	E	T	A	A	V	G	F	N	L	S	L	G	I	G
Query Conservation																			.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	Q	W	M	Q	T	L	K	A	A	G	I	P	A	A	I	L	T	A	K	H	A	D	G	F	C	L	W	P	S	K	Y	T	D	Y	S	V	K	N	A	A	W	K	N	G	K	G	D	V	V	R	E	F	V	D	A	C	E	E	Y	G	L	K	A	G	I	Y	L	G	P	H	D	R	H	E	H	L	S	P	L
Template Known Secondary structure												T											T	T			B	S	S			T	T		S	S	B	G	G	G	S	S	G	G	G	G	T															T									S	S						T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.		.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	D	K	N	H	P	.	S	V	V	M	W	S	I	A	N	E	P	D	T	R	P	Q	G	A	R	E	Y	F	A	P	L	A	E	A	T	R	K	L	D	P	T	R	P	I
Query Conservation																																									.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.		.															.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.																	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	T	T	E	R	Y	K	E	Y	Y	A	H	Q	L	G	E	L	M	S	D	Y	G	.	.	K	I	W	E	T	W	W	D	G	A	G	A	D	E	L	T	.	.	.	.	T	P	V	Y	R	H	W	Y	K	I	V	R	E	K	Q	P	D	C	V	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																				S	S		.	.										T	T		T	T			.	.	.	.																T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.																	.	.	.	.
Template SS confidence
																159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.					.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions