Job Description P05804 Confidence 99.66% Date Thu Jan 5 10:58:55 GMT 2012 Rank 86 Aligned Residues 197 % Identity 21% Template c2y8kA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:carbohydrate binding family 6; PDBTitle: structure of ctgh5-cbm6, an arabinoxylan-specific xylanase. Resolution 1.47 Å

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		274	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure												.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	V	K	G	E	Q	F	L	I	.	N	H	K	P	F	Y	F	T	G	F	G	R	H	E	D	A	D	L	R	G	K	G	F	D	N	V	L	M	V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	S	H	Y	P	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																				.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.
Template Sequence		L	N	A	A	R	T	T	F	V	G	D	N	G	Q	P	L	R	G	P	Y	T	S	T	E	W	T	A	A	A	P	.	.	.	.	.	.	.	.	.	Y	D	Q	I	A	R	V	K	E	L	G	F	N	A	V	H	L	Y	A	E	C	F	D	P	R	Y	P	A	P	G	S	K	A	P	G	Y	A	V	N	E	I
Template Known Secondary structure				T	T	S	S	S				T	T	S		B									S	S	S					.	.	.	.	.	.	.	.	.					G	G	G	G	G	G	T													T	T	T	T	S	T	T				T	T	T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.										.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	M	L	D	W	A	D	E	H	G	I	V	V	I	D	E	T	A	A	V	G	F	N	L	S	L	G	I	G	F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	D	K	N	H	P	S	V	V	M	W	S	I	A	N	E	P
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		D	K	I	V	E	R	T	R	E	L	G	L	Y	L	V	I	T	I	G	N	G	A	N	N	G	N	H	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	W	A	R	D	F	W	K	F	Y	A	P	R	Y	A	K	E	T	H	V	L	.	Y	E	I	H	N	E	P
Template Known Secondary structure												T										T	T		T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T		T	T			.					S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.																							.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.
												415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.																				.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	D	T	R	P	Q	G	A	R	E	Y	F	A	P	L	A	E	A	T	R	K	L	D	P	T	R	P	I	T	C	V	N	V	M	F	C	D	A	H	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	I	S	D	L	F	D	V	L	C	L
Query Conservation		.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	W	G	P	P	Y	S	S	S	T	A	N	P	P	G	A	V	D	M	E	I	D	V	Y	R	I	I	R	T	Y	A	P	E	T	P	V	L	L	F	S	Y	A	V	F	G	G	K	G	G	A	A	E	A	L	K	D	I	R	A	F	N	K	A	V	F	G	N	E	N	A	V	W	T	N	E	A	V	A	F
Template Known Secondary structure		S	S	S		S		T	T	S	T	T	S	S	S	T	T																	T	T	S								S																								S	S	T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	Y	Y	G	W	Y	V	Q	S	G	D	L	E	T	A	E	K	V	L	E	K	E	L	L	A	W	Q	E	K	L	H	Q	P	I	I	I	T	E	Y	G	V	D	T	L	A	G	L	H
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	G	Y	A	G	W	Q	E	T	T	I	A	V	E	E	L	L	K	A	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	P	C	F	M	T	E	Y	A	G	G	G	S	G	M	G	G
Template Known Secondary structure			S	T	T															T	.	.	.	.	.	.	.	.	.	.	.	.	T														S		S	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.													.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions