Job Description P05804 Confidence 98.97% Date Thu Jan 5 10:58:55 GMT 2012 Rank 146 Aligned Residues 240 % Identity 13% Template c2y2wC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:arabinofuranosidase; PDBTitle: elucidation of the substrate specificity and protein2 structure of abfb, a family 51 alpha-l-arabinofuranosidase3 from bifidobacterium longum. Resolution 2.50 Å

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		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.																																		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	S	H	Y	P	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	M	L	D	W	A	D	E	H	G	I	V	V	I	D	E	T	A	A	V	G	F	N
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																																																																																	.
Template Sequence		Q	D	V	L	D	L	V	K	E	L	G	V	T	C	V	R	Y	P	G	G	N	F	V	S	N	Y	N	W	E	D	G	I	G	P	R	E	N	R	P	M	R	R	D	L	A	W	H	C	T	E	T	N	E	M	G	I	D	D	F	Y	R	W	S	Q	K	A	G	T	E	I	M	L	A	V	N	M	G	T	R	.
Template Known Secondary structure												T							S		S	G	G	G	G	G			G	G	G	G	S	S		G	G	G							T	T	T	T						S	S	S												T										S	S		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.								.	.	.	.	.	.	.	400	.	.	.				.	.	.	.	.	.	410	.	.	.	.	.	.	.	.								.	420	.
Predicted Secondary structure																																				.	.	.	.	.	.	.												.	.	.																.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.												.	.	.																.	.	.	.	.	.	.
Query Sequence		L	S	L	G	I	G	F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	.	.	.	.	.	.	.	K	E	L	I	A	R	D	K	N	H	P	.	.	.	S	V	V	M	W	S	I	A	N	E	P	D	T	R	P	.	.	.	.	.	.	.	Q	G	A
Query Conservation																																				.	.	.	.	.	.	.												.	.	.																.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.												.	.	.																.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	K	A	A	L	D	E	L	E	Y	V	N	G	A	P	G	T	A	W	A	D	Q	R	V	A	N	G	I	E	E	P	M	D	I	K	M	W	C	I	G	N	E	M	D	G	P	W	Q	V	G	H	M	S	P	E	E	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T	S									T	T			S										S	S				S	T	T	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																								173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.										.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	Y	F	A	P	L	A	E	A	T	R	K	L	D	P	T	R	P	I	T	C	V	N	V	M	F	C	D	A	H	T	D	T	I	.	.	.	.	.	.	.	.	.	S	D	L	F	D	V	L	C	L	N	R	Y	Y	G	W	Y	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																					.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	A	V	D	K	V	A	H	A	M	K	L	A	E	S	G	L	E	L	V	A	C	G	S	S	G	A	Y	M	P	T	F	G	T	W	E	K	T	V	L	T	K	A	Y	E	N	L	D	F	V	S	C	H	A	Y	Y	F	D	R	G	H	K	T	R	A	A	A	S	M	Q	D	F	L	A	S	S	E	D	M
Template Known Secondary structure																	T	T									S		T	T		T	T	T	T											G	G	G													T	T	T	T	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.											.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.
Query Sequence		S	G	D	L	E	T	A	E	K	V	L	E	K	E	L	L	A	W	Q	E	K	L	H	Q	P	I	I	I	T	E	Y	G	V	D	T	L	A	G	L	H	S	M	Y	T	.	.	.	.	.	.	.	.	.	.	D	M	W	S	E	E	Y	Q	C	A	W	L	D	M	Y	H	R	V	F	D	R	V	S	A	V	V
Query Conservation																																														.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	K	F	I	A	T	V	S	D	A	A	D	Q	A	R	E	A	N	N	G	T	K	D	I	A	L	S	F	D	E	W	G	V	W	Y	S	D	K	W	G	L	H	H	E	P	W	P	K	S	P	H	L	L	E	D	I	Y	T	A	A	D	A	V	V	E	G	S	L	M	I	T	L	L	K	H	C	D	R	V	R
Template Known Secondary structure																				T		S	S														G	G	G						S				S	S				S					B																	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.			.	.	.	580	.	.	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		G	E	Q	V	W	N	F	A	D	F	A	T	S	Q	G	I	L	R	V	G	G	N	K	K	G	I	F	T	R	D	R	K	.	.	P	K	S	A	A	F	L	L	Q
Query Conservation																																		.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	S	R	A	Q	L	V	N	V	I	A	P	I	.	.	.	.	.	.	.	.	.	.	.	M	A	E	E	H	G	P	A	W	R	Q	T	T	F	Y	P	F	A
Template Known Secondary structure								S	B	S	T	T		S		.	.	.	.	.	.	.	.	.	.	.				T	T	S						T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.												.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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