Job Description P05804 Confidence 100.00% Date Thu Jan 5 10:58:55 GMT 2012 Rank 21 Aligned Residues 284 % Identity 13% Template c2w62A_ PDB info PDB header:transferase Chain: A: PDB Molecule:glycolipid-anchored surface protein 2; PDBTitle: saccharomyces cerevisiae gas2p in complex with2 laminaripentaose Resolution 1.85 Å

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		271	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.							.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330				.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.																								.	.	.	.	.	.																										.	.	.
Query SS confidence														.	.																								.	.	.	.	.	.																										.	.	.
Query Sequence		I	R	S	V	A	V	K	G	E	Q	F	L	.	.	I	N	H	K	P	F	Y	F	T	G	F	G	R	H	E	D	A	D	L	R	G	K	G	.	.	.	.	.	.	F	D	N	V	L	M	V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	S	H	.	.	.	Y	P	Y	A	E	E	M	L	D
Query Conservation														.	.																								.	.	.	.	.	.																										.	.	.
Alig confidence														.	.																								.	.	.	.	.	.																										.	.	.
Template Conservation
Template Sequence		T	P	A	I	K	I	V	G	N	K	F	F	D	S	E	S	G	E	Q	F	F	I	K	G	I	A	Y	Q	L	Q	R	S	G	A	F	E	T	S	Y	I	D	A	L	A	D	P	K	I	C	L	R	D	I	P	F	L	K	M	L	G	V	N	T	L	R	V	Y	A	I	D	P	T	K	S	H	D	I	C	M	E
Template Known Secondary structure		S							T	T					T	T	T			B																S	S		S	S			G	G	G																T		S					S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	A	D	E	H	G	I	V	V	I	D	E	T	A	A	V	G	F	N	L	S	L	G	I	G	F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	D	K	N	H	P	S	V	V	M	W	S	I	A	N	E	P	D	T	R	P	Q
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	S	A	E	G	M	Y	V	L	L	D	L	S	E	P	D	I	S	I	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	P	S	W	D	V	H	I	F	E	R	Y	K	S	V	I	D	A	M	S	S	F	P	N	L	L	G	Y	F	A	G	N	E	V	T	N	D	H	T
Template Known Secondary structure						T	T							S		B	T	T	B	S			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S																			T	T		T	T									S	S	S		S	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.																			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		420	.	.							.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460								.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.																																							.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.																																							.	.	.	.	.	.	.
Query Sequence		G	A	R	.	.	.	.	.	.	E	Y	F	A	P	L	A	E	A	T	R	K	L	D	P	T	R	P	I	T	C	V	N	V	M	F	C	D	A	H	T	D	T	I	S	D	L	F	.	.	.	.	.	.	.	D	V	L	C	L	N	R	Y	Y	G	W	Y	V	Q	S	G	D	L	E	T	A	E	K	V	L	E
Query Conservation					.	.	.	.	.	.																																							.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.																																							.	.	.	.	.	.	.									.				.	.	.
Template Conservation																																																																.				.	.	.
Template Sequence		N	T	F	A	S	P	F	V	K	A	A	I	R	D	A	K	E	Y	I	S	H	S	N	H	R	K	I	P	V	G	Y	S	T	N	D	D	A	M	T	R	D	N	L	A	R	Y	F	V	C	G	D	V	K	A	D	F	Y	G	I	N	M	Y	.	E	W	C	.	.	.	G	Y	S	T	Y	G	T	S	G	Y	R
Template Known Secondary structure			G	G	G																		S	S	S													T	T	T								T	T	B	T	T				S								.				.	.	.	S	S							S
Template Predicted Secondary structure																																																																.				.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.				.	.	250	.	.	.	.	.	.	.	.
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	L	L	A	W	Q	E	K	L	H	Q	P	I	I	I	T	E	Y	G	V	D	T	L	A	G	L	H	S	M	Y	T	D	M	W	S	E	E	Y	Q	C	A	W	L	D	M	Y	H	R	V	F	D	R	V	S	A	V	V	G	E	Q	V	W	N	F	A	D	F	A	T	S	Q	G	I	L	R	V	G	G	N
Query Conservation
Alig confidence												.														.	.	.	.	.	.								.														.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation												.														.	.	.	.	.	.								.														.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Sequence		E	R	T	K	E	F	E	G	Y	P	.	I	P	V	F	F	S	E	F	G	C	N	L	V	.	.	.	.	.	.	R	P	R	P	F	T	E	.	V	S	A	L	Y	G	N	K	M	S	S	V	W	.	.	.	.	.	.	S	G	G	L	A	Y	M	Y	F	E	.	.	.	.	.	.	.	.	.	.	E	E	N
Template Known Secondary structure								T	T		S	.	S											S	S	.	.	.	.	.	.	S	S				T		.					T	S					T	T		.	.	.	.	.	.						S		S	B		.	.	.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure												.														.	.	.	.	.	.								.														.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.							.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.							.	.	.	.	.	.	.	.	310	.											.	.	.
		567	.	.	570	.	.	.	.	.					.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		K	K	G	I	F	T	R	D	R	.	.	.	.	K	P	K	S	A	A	F	L	L	Q	K	R	W	T	G	M	N	F	G	E	K	P	Q	Q	G
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.
Template Conservation
Template Sequence		E	Y	G	V	V	K	I	N	D	N	D	G	V	D	I	L	P	D	F	K	N	L	K	K	E	F	A	K	A	D	P	K	G	I	T	E	E	E
Template Known Secondary structure		S			S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions