Job Description P05804 Confidence 99.86% Date Thu Jan 5 10:58:55 GMT 2012 Rank 47 Aligned Residues 255 % Identity 17% Template c2oylB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:endoglycoceramidase ii; PDBTitle: endo-glycoceramidase ii from rhodococcus sp.: cellobiose-like2 imidazole complex Resolution 1.80 Å

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		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.																	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	H	K	P	F	Y	F	T	G	F	G	R	H	E	D	A	D	L	R	G	K	G	F	D	N	V	L	M	V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	S	H	Y	P	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	M	L	D	W	A	D	E	H	G	I	V
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	G	R	S	L	I	L	R	G	F	N	T	A	S	S	A	K	S	A	P	D	G	M	P	Q	F	T	E	A	D	L	A	R	E	Y	A	D	M	G	T	N	F	V	R	F	L	I	S	W	R	S	V	E	P	A	P	G	V	Y	D	Q	Q	Y	L	D	R	V	E	D	R	V	G	W	Y	A	E	R	G	Y	K
Template Known Secondary structure		T													G	G	G	T	T		T	T	S			S																													S	B	T	T	B																			T	T
Template Predicted Secondary structure
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380																																	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	D	E	T	A	A	V	G	F	N	L	S	L	G	I	G	F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	M	L	D	M	H	Q	D	V	Y	S	G	A	I	T	P	G	A	G	A	I	G	N	G	A	P	A	W	A	T	Y	M	D	G	L	P	V	E	P	Q	P	R	W	E	L	Y	Y	I	Q	P	G	V	M	R	A	F	D	N	F	W	N	T	T	G	K	H	P	E	L	V	E	H	Y	A	K	A	W	R	A	V
Template Known Secondary structure									B	S	S		G	G	G						S	S	S	B	S	S		G	G	G				T	T							S	S	G	G	G	G	G	G	S											T	T	S	S	S	S		T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.									.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.											.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	R	D	K	N	H	P	S	V	V	M	W	S	I	A	N	E	P	D	T	R	P	.	.	.	.	.	.	.	.	Q	G	A	R	E	Y	F	A	P	L	A	E	A	T	R	K	L	D	P	T	R	P	I	T	C	V	N	V	M	.	.	.	.	.	.	.	.	.	.	F	C	D	A	H	T	D	T	I	S
Query Conservation																									.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	R	F	A	D	N	D	A	V	V	A	Y	D	L	M	N	E	P	F	G	G	S	L	Q	G	P	A	F	E	A	G	P	L	A	A	M	Y	Q	R	T	T	D	A	I	R	Q	V	D	Q	D	T	W	V	C	V	A	P	Q	A	I	G	V	N	Q	G	L	P	S	G	L	T	K	I	D	D	P	R	A	G
Template Known Secondary structure						T	T		T	T								S	S				T	T			T					T	T														T	T	T		S	S	S								S	T	T	G	G	G	T												S	S	S
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490						.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
Predicted Secondary structure																																			.	.	.	.	.
Query SS confidence																																			.	.	.	.	.
Query Sequence		D	L	F	D	V	L	C	L	N	R	Y	Y	G	W	Y	V	Q	S	G	D	L	E	T	A	E	K	V	L	E	K	E	L	L	.	.	.	.	.	A	W	Q	E	K	L	H	Q	P	I	I	I	T	E	Y	G	V	D	T	L	A	G	L	H	S	M	Y	T	D	M	W	S	E	E	Y	Q	C	A	W	L	D	M
Query Conservation																																			.	.	.	.	.
Alig confidence																																			.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	Q	R	I	A	Y	C	P	H	L	Y	P	L	P	L	D	H	E	G	L	A	R	T	L	T	D	V	T	I	D	A	W	R	A	N	T	A	H	T	A	R	V	L	G	D	V	P	I	I	L	G	E	F	G	L	D	T	.	.	.	.	.	.	.	.	.	.	.	.	T	L	P	G	A	R	D	Y	I	E	R
Template Known Secondary structure		S								B				G	G	G																												T	T	S			B				B					T	.	.	.	.	.	.	.	.	.	.	.	.	T	S	T	T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.													.	.	.	.	.	.	.	360	.	.	.
		533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	H	R	V	F	D	R	V	S	A	V	V	G	E	Q	V	W	N	F	A
Query Conservation
Alig confidence									.	.
Template Conservation									.	.
Template Sequence		V	Y	G	T	A	R	E	.	.	M	G	A	G	V	S	Y	W	S	S	D
Template Known Secondary structure									.	.		T						S			S
Template Predicted Secondary structure									.	.
Template SS confidence
		368	.	370	.	.	.	.			.	.	.	.	.	380	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions