 |
Job Description | P05804 | Confidence | 98.39% | Date | Thu Jan 5 10:58:55 GMT 2012 |
Rank | 150 | Aligned Residues | 71 |
% Identity | 15% | Template | c2okxB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:rhamnosidase b; |
PDBTitle: crystal structure of gh78 family rhamnosidase of bacillus sp. gl1 at2 1.9 a
|
Resolution | 1.90 Å |
|
 |
  |   |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  | . | . | . | . | . |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | N | V | W | Y | Q | R | E | V | F | I | P | K | G | W | A | G | Q | R | I | V | L | R | F | D | A | V | T | H | Y | G | K | V | W | V | N | N | Q | E | V | M | E | . |
. |
. |
. |
. |
H | Q | G | G | Y | T | P | F | E | A | D | V | T | P | Y | V | I | A | G | K | S | V | R | I | T | V | C | V | N | N |
Query Conservation |   |
  |   |   |   |
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |
|   |
|   |
|
|
|   |   |
|
|   | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|   |   |
|   |   |
|   |
|   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|
|   |
|   |
|   |   |   | . |   |
|   |   |
|   |
|   |
|
|
| . |
|   |
|
|   |
|   |
|
|
|   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |
|   |   |
|   |   |
|   |
|
|
|   |
|   |   |
Template Sequence |   |
N | E | W | R | C | F | R | G | S | F | D | A | P | A | S | . |
V | E | G | P | A | M | L | H | I | T | A | . |
D | S | R | Y | V | L | F | V | N | G | E | Q | V | G | R | G | P | V | R | S | W | P | K | E | Q | F | Y | D | S | Y | D | I | G | G | Q | L | R | P | G | V | R | N | T | I | A | V | L | V | L | H |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |  |  |  |
|
| S |
| . |
|
| S |
|
|  |  |  |  |  |  | . |  | S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|
|
|
| B | T | T |  |  |  |  |  |  |  |  |
| T | T | T |
|
| T | T | S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
. | . | . | . | 40 | . | . | . | . | . | . | |
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|