Job Description P05804 Confidence 99.74% Date Thu Jan 5 10:58:55 GMT 2012 Rank 71 Aligned Residues 272 % Identity 13% Template c2jepB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:xyloglucanase; PDBTitle: native family 5 xyloglucanase from paenibacillus pabuli Resolution 1.4 Å

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		291	.	.	.								.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.																			.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	F	G	.	.	.	.	.	.	.	R	H	E	D	A	D	L	R	G	K	G	F	D	N	V	L	M	V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	S	H	Y	P	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	M	L	D	W	A	D	E	H	G
Query Conservation						.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	W	N	L	G	N	Q	L	E	A	A	V	N	G	T	P	N	E	T	A	W	G	N	P	T	V	T	P	E	L	I	K	K	V	K	A	A	G	F	K	S	I	R	I	P	V	S	Y	L	N	N	I	G	S	A	P	N	Y	T	I	N	A	A	W	L	N	R	I	Q	Q	V	V	D	Y	A	Y	N	E	G
Template Known Secondary structure		S						S	S	T	T				T	T				T	T	T	T	S															T	T											G	G	G	B			T	T	T			B																	T	T	T
Template Predicted Secondary structure
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		I	V	V	I	D	E	T	A	A	V	G	F	N	L	S	L	G	I	G	F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	D	K	N	H	P	S	V	V	M	W	S	I	A	N	E	P	D	T	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.
Template Sequence		L	Y	V	I	I	N	I	H	G	D	G	Y	.	.	.	.	.	.	.	.	.	N	S	V	Q	G	G	W	L	L	V	N	G	G	N	Q	T	A	I	K	E	K	Y	K	K	V	W	Q	Q	I	A	T	K	F	S	N	Y	N	D	R	L	I	F	E	S	M	N	E	V	F	D	G	N	Y	G	N	P	N	S	A
Template Known Secondary structure										G	G	G		.	.	.	.	.	.	.	.	.	T	T	S	T	T					T	T		S																				T	T	T			T	T							S	S				S			S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.										.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.				.	.	.	.	440	.	.	.	.	.	.	.																		.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Query Sequence		R	P	Q	G	A	R	E	Y	F	A	P	L	A	E	A	T	R	K	L	.	.	.	D	P	T	R	P	I	T	C	V	N	V	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	C	D	A	H	T	D	T	I	S	D	L	F	D	V	L	C	L	N	R	Y	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Alig confidence																					.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	Y	T	N	L	N	A	Y	N	Q	I	F	V	D	T	V	R	Q	T	G	G	N	N	N	A	R	W	L	L	V	P	G	W	N	T	N	I	D	Y	T	V	G	N	Y	G	F	T	L	P	T	D	N	Y	R	S	S	A	I	P	S	S	Q	K	R	I	M	I	S	A	H	Y	Y	S	P	W	D	F	A	G	E
Template Known Secondary structure																				S	S	G	G	G	G	T	S							G	G	G							S	S	S	S							T	T	S		T	T	S		T	T													S					T
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
															469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	W	Y	V	Q	S	G	D	L	E	T	A	E	K	V	L	E	K	E	L	L	A	W	Q	E	K	L	H	Q	P	I	I	I	T	E	Y	G	V	D	T	L	A	G	L	H	S	M	Y	T	D	M	W	S	E	E	Y	Q	C	A	W	L	D	M	Y	H	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.
Template Sequence		E	N	G	N	I	T	Q	W	G	A	T	S	T	N	P	A	K	K	S	T	W	G	Q	E	D	Y	L	E	S	Q	F	K	S	M	Y	D	K	F	V	T	Q	G	Y	P	V	V	I	G	E	F	G	S	I	D	K	T	S	Y	D	S	S	.	.	.	.	.	N	N	V	Y	R	A	A	Y	A	K	A	V	T	A
Template Known Secondary structure		S	S	S	S			B		S	T	T		S		G	G	G	B		S	S		S															T	G	G	G	T														T	T	T		T	T	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.						.	.	.	.	340	.	.	.	.	.	.	.	.	.
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	D	R	V	S	A	V	V	G	E	Q	V	W	N	F	A	D	F	A	T	S	Q	G	I	L	R	V	G	G	N	K	K	G	I	F	T	R	D	R	K	P	K	S	A	A	F	L	L	Q	K	R
Query Conservation
Alig confidence								.	.											.	.	.	.	.	.	.	.	.
Template Conservation								.	.											.	.	.	.	.	.	.	.	.
Template Sequence		K	A	K	K	Y	K	.	.	M	V	P	V	Y	W	D	N	G	H	.	.	.	.	.	.	.	.	.	N	G	Q	H	G	F	A	L	F	N	R	S	N	N	T	V	T	Q	Q	N	I	I	N	A	I
Template Known Secondary structure						T	T	.	.									S		.	.	.	.	.	.	.	.	.		S	T	T				S			T	T	T	T			S
Template Predicted Secondary structure								.	.											.	.	.	.	.	.	.	.	.
Template SS confidence
		350	.	.	.	.	.			.	.	.	.	360	.	.	.	.	.										.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions