Job Description P05804 Confidence 50.21% Date Thu Jan 5 10:58:55 GMT 2012 Rank 288 Aligned Residues 126 % Identity 18% Template c2gjxE_ PDB info PDB header:hydrolase Chain: E: PDB Molecule:beta-hexosaminidase alpha chain; PDBTitle: crystallographic structure of human beta-hexosaminidase a Resolution 2.80 Å

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		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330																													.	.	.	.	.			.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Query Sequence		F	D	N	V	L	M	V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	Y	A	E	.	.	E	M	L	D	W	A	D	E	H	G	I	V	V	I	D	E	T	A	A	V
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Conservation
Template Sequence		L	P	L	S	S	I	L	D	T	L	D	V	M	A	Y	N	K	L	N	V	F	H	W	H	L	V	D	D	P	S	F	P	Y	E	S	F	T	F	P	E	L	M	R	K	G	S	Y	N	P	V	T	H	I	Y	T	A	Q	D	V	K	E	V	I	E	Y	A	R	L	R	G	I	R	V	L	A	E	F	D	T	P
Template Known Secondary structure																	T	T											S	S				B			S	S		T	T	T	T	T	T	T	S	S	S	T	T	T	T		B														T	T	T						B				S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		356	.	.	.	360	.	.	.	.	.	.	.	.	.									370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	F	N	L	S	L	G	I	G	F	E	A	G	N	.	.	.	.	.	.	.	.	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	D	K	N	H	P	S	V	V	M	W	S	I	A	N	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.																															.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.
Template Sequence		G	H	T	L	S	W	G	P	G	I	P	G	L	L	T	P	C	Y	S	G	S	E	P	S	G	T	F	G	P	V	N	P	S	L	N	N	T	Y	E	F	M	S	T	F	F	L	E	V	S	S	V	F	.	.	.	P	D	F	Y	L	H	L	G	G	D	E	V	D	F	T	C	W	K	S	N	P	E	I	Q	D
Template Known Secondary structure		S	S		T	T	S	T	T	T	S		S							S	S	S	S			S								S	S	S	T	T	T	T														.	.	.		S	S
Template Predicted Secondary structure																																																						.	.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.				.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
										415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	D	T	R	P	Q	G	A	R	E	Y	F	A	P	L	A	E	A	T	R	K
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	M	R	K	K	G	F	G	E	D	F	K	Q	L	E	S	F	Y	I	Q	T	L	L	D	I	V	S	S
Template Known Secondary structure							T		T	T		S
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions