Job Description P05804 Confidence 74.00% Date Thu Jan 5 10:58:55 GMT 2012 Rank 231 Aligned Residues 120 % Identity 13% Template c2e8yA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:amyx protein; PDBTitle: crystal structure of pullulanase type i from bacillus subtilis str.2 168 Resolution 2.11 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		315	.	.	.	.	320	.	.	.	.	.	.	.	.																				.	330	.	.	.																								.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	A	L	M	D	W	I	G	A	N	S	Y	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	Y	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	E	M	L	D	W	A	D	E	H	G	I	V	V	I	D	E	T
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	Y	V	K	E	L	G	V	T	H	V	E	L	L	P	V	N	D	F	A	G	V	D	E	E	K	P	L	D	A	Y	N	W	G	Y	N	P	L	H	F	F	A	P	E	G	S	Y	A	S	N	P	H	D	P	Q	T	R	K	T	E	L	K	Q	M	I	N	T	L	H	Q	H	G	L	R	V	I	L	D	V
Template Known Secondary structure									T		S					S						S	S	S		T	T	S	G	G	G							S									S	T	T	S	S		S	S	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		353	.	.	.	.																.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	V	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	S	L	G	I	G	F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	D	K	N	H	P	S	V	V	M	W	S	I	A	N	E	P	D	T	R
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.															.	.
Template Conservation																																																																.	.															.	.
Template Sequence		V	F	N	H	V	Y	K	R	E	N	S	P	F	E	K	T	V	P	G	Y	F	F	R	H	D	E	C	G	K	P	S	N	G	T	G	V	G	N	D	I	A	S	E	R	R	M	A	R	K	F	I	A	D	C	V	V	Y	W	L	E	E	Y	.	.	N	V	D	G	F	R	F	D	L	L	G	I	L	D	.	.
Template Known Secondary structure			T	T			S	S	G	G	G	S						S	T	T	T	S	B		B		T	T	S	S	B			T	T	S	S	S			B		T	T	S																			.	.								T	T	G	G	G	S	B	.	.
Template Predicted Secondary structure																																																																.	.															.	.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.			.	400	.	.	.	.	.	.	.	.	.	410	.	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	G	A	R	E	Y	F	A	P	L	A	E	A	T	R	K	L	D	P	T	R	P	I	T
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	I	D	T	V	L	Y	M	K	E	K	A	T	K	A	K	P	G	I	L	L	F
Template Known Secondary structure		.	.	.	.															S	T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions