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Job DescriptionP05804
Confidence99.73%DateThu Jan 5 10:58:55 GMT 2012
Rank72Aligned Residues277
% Identity15%Templatec2cncA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:endoxylanase; PDBTitle: family 10 xylanase
Resolution2.4 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  YFTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHYPYA. . . . . . . . . . . . . EEMLDWADEHGIVVIDETAAV
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Template Sequence  FLIGAALNATIASG. . . . ADERLNTLI. . AKEFNSITPENCMKWGVLRDAQGQWNWKDADAFVAFGTKHNLHMVGHTLVW
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SSSTTSB
TTS
B

T

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Query Sequence  GFNLSLGIGFEAGNKPKELYSEEAVNGETQQAHLQAIKELIARDKNHPSVVMWSIANEPDT. . . . . . . . . . RPQGAREYF
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Template Sequence  HSQIHDEVFKNADGSY. . . . . . . ISKAALQKKMEEHITTLAGRYKGK. . LAAWDVVNEAVGDDLKMRDSHWYKIMGDDFI
Template Known Secondary structure  SSS

GGGTB
TTS
B.......

BTT..BS

B
TTSSB


TT
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Query Sequence  APLAEATRKLDPTRPITCVNVMFCDAHTD. . . . . . . . . . . TISDLFDVLCLNRYYGWYVQSGDLETAEKVLEKELLAWQE
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Template Sequence  YNAFTLANEVDPKAHLMYNDYNIERTGKREATVEMIERLQKRGMPIHGLGIQGHL. . GIDTPPIAEIEKSIIAFA. . . . .
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TT
SSTTSTTTTT





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Query Sequence  KLHQPIIITEYGVDTLAGLHSMYTDMW. . . . . . . . . . . . . . . . . . . . SEEYQCAWLDMYHRVFDRVS. AVVGEQVWNFAD
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Template Sequence  KLGLRVHFTSLDVDVLPSVWELPVAEVSTRFEYKPERDPYTKGLPQEMQDKLAKRYEDLFKLFIKHSDKIDRVTFWGVSD
Template Known Secondary structure  TTT

S

STT

GGGTTTTTS

GGGSTTTT


TTTTS
SBG
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Query Sequence  . . FATSQGILRVGGNKKGIFTRDRKPKSAAFLLQKR
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Template Sequence  DASWLNDFSIPGRTNYPLLFDRKLQPKDAYFRLLDL
Template Known Secondary structure  GG
GGGTSSSTT




SSB
TTS
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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