Job Description P05804 Confidence 99.07% Date Thu Jan 5 10:58:55 GMT 2012 Rank 143 Aligned Residues 240 % Identity 12% Template c2c8nD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:alpha-l-arabinofuranosidase; PDBTitle: the structure of a family 51 arabinofuranosidase, araf51,2 from clostridium thermocellum in complex with 1,3-linked3 arabinoside of xylobiose. Resolution 2.9 Å

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		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.																																		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	S	H	Y	P	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	M	L	D	W	A	D	E	H	G	I	V	V	I	D	E	T	A	A	V	G	F	N
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																																																																																	.
Template Sequence		K	D	V	I	E	L	V	K	E	L	N	V	P	I	I	R	Y	P	G	G	N	F	V	S	N	Y	F	W	E	D	G	V	G	P	V	E	D	R	P	R	R	L	D	L	A	W	K	S	I	E	P	N	Q	V	G	I	N	E	F	A	K	W	C	K	K	V	N	A	E	I	M	M	A	V	N	L	G	T	R	.
Template Known Secondary structure												T							S		S	G	G	G	G	G			G	G	G	G	S	S		T	T	T							T	T	T	T							S		T										T	T										S	S		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.								.	.	.	.	.	400	.	.	.	.				.	.	.	.	.	410	.	.	.	.	.	.								.	.	.	420	.
Predicted Secondary structure																																						.	.	.	.	.	.	.											.	.	.													.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.											.	.	.													.	.	.	.	.	.	.
Query Sequence		L	S	L	G	I	G	F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	.	.	.	.	.	.	.	L	I	A	R	D	K	N	H	P	S	.	.	.	V	V	M	W	S	I	A	N	E	P	D	T	.	.	.	.	.	.	.	R	P	Q	G	A
Query Conservation																																						.	.	.	.	.	.	.											.	.	.													.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.											.	.	.													.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	S	D	A	C	N	L	L	E	Y	C	N	H	P	G	G	S	K	Y	S	D	M	R	I	K	H	G	V	K	E	P	H	N	I	K	V	W	C	L	G	N	A	M	D	G	P	W	Q	V	G	H	K	T	M	D	E	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																S	S	S									T	T			S										S					S	T	T	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																								131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.										.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.													.	.	.	.	480
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	Y	F	A	P	L	A	E	A	T	R	K	L	D	P	T	R	P	I	T	C	V	N	V	M	F	C	D	A	H	T	D	T	I	.	.	.	.	.	.	.	.	.	S	D	L	F	D	V	L	C	L	N	R	Y	Y	G	W	Y	V	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	G	D	L	E	T
Query Conservation																																					.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	I	A	E	E	T	A	R	A	M	K	M	I	D	P	S	I	E	L	V	A	C	G	S	S	S	K	D	M	P	T	F	P	Q	W	E	A	T	V	L	D	Y	A	Y	D	Y	V	D	Y	I	S	L	H	Q	Y	Y	G	N	K	E	N	D	T	A	D	F	L	A	K	S	D	D	L	D	D	F	I	R	S
Template Known Secondary structure																	T	T									S		T	T	S	T	T	T	T											G	G	G													T	T								T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.													.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.		.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.																																		.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.																																		.
Query Sequence		A	E	K	V	L	E	K	E	L	L	A	W	Q	E	K	L	H	Q	P	I	I	I	T	E	Y	G	V	D	.	.	.	.	.	.	.	.	.	.	.	.	T	L	A	G	L	H	S	M	Y	T	D	M	W	S	E	E	Y	Q	C	A	W	L	D	M	Y	H	R	V	F	D	R	V	S	.	A	V	V	G	E	Q
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.																																		.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation
Template Sequence		V	I	A	T	C	D	Y	I	K	A	K	K	R	S	K	K	D	I	Y	L	S	F	D	E	W	N	V	W	Y	H	S	N	N	E	D	A	N	I	Q	N	E	P	W	R	I	A	P	P	L	L	E	D	I	Y	T	F	E	D	A	L	L	V	G	L	M	L	I	T	L	M	K	H	A	D	R	I	K	I	A	C
Template Known Secondary structure														T		S															T	T										S				S	S				S					B																	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		548	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.				.	.	.	.	580	.	.	.	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		V	W	N	F	A	D	F	A	T	S	Q	G	I	L	R	V	G	G	N	K	K	G	I	F	T	R	D	R	.	.	.	K	P	K	S	A	A	F	L	L	Q
Query Conservation																														.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.							.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	Q	L	I	N	V	I	A	P	I	.	.	.	.	.	.	.	.	.	.	.	V	T	E	R	N	G	G	A	A	W	R	Q	T	I	F	Y	P	F	M
Template Known Secondary structure					S	B	S	S	S		S		.	.	.	.	.	.	.	.	.	.	.				S	S	S							T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360												.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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