Job Description P05804 Confidence 99.72% Date Thu Jan 5 10:58:55 GMT 2012 Rank 73 Aligned Residues 267 % Identity 16% Template c2bs9B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-xylosidase; PDBTitle: native crystal structure of a gh39 beta-xylosidase xynb12 from geobacillus stearothermophilus Resolution 2.2 Å

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		309	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.																								.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure												.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	M	V	H	D	H	A	L	M	.	D	W	I	G	A	N	S	Y	R	T	S	H	Y	P	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	M	L	D	W	A	D	E	H	G	I	V	V	I	D	E	T	A	A	V	G	F	N	L	S	L	G	I	G
Query Conservation												.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																																																																									.	.
Template Sequence		K	E	Y	L	D	H	L	K	L	V	Q	E	K	I	G	F	R	Y	I	R	G	H	G	L	L	S	D	D	V	G	I	Y	R	E	V	E	I	D	G	E	M	K	P	F	Y	N	F	T	Y	I	D	R	I	V	D	S	Y	L	A	L	N	I	R	P	F	I	E	F	G	F	M	.	.	P	K	A	L	A	S	G
Template Known Secondary structure															S			S					S		T	T	S	T	T	T									T	T																					T	T										B	.	.		G	G	G	B	S	S
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.								.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure																																					.																	.	.	.	.	.	.	.
Query SS confidence																																					.																	.	.	.	.	.	.	.
Query Sequence		F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	D	.	K	N	H	P	S	V	V	M	W	S	I	A	N	E	P	D	.	.	.	.	.	.	.	T	R	P	Q	G	A	R	E	Y	F	A	P	L	A	E	A	T	R	K	L	D
Query Conservation																																					.																	.	.	.	.	.	.	.
Alig confidence																																					.																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	Q	T	V	F	Y	W	K	G	N	V	T	P	P	K	D	Y	N	K	W	R	D	L	I	V	A	V	V	S	H	F	I	E	R	Y	G	I	E	E	V	R	T	W	L	F	E	V	W	N	E	P	N	L	V	N	F	W	K	D	A	N	K	Q	E	Y	F	K	L	Y	E	V	T	A	R	A	V	K	S	V	D
Template Known Secondary structure						T	T	T	T				S		B	S																										T	T						S	S		T	T	S	T	T	T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.									.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.														470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	T	R	P	I	T	C	V	N	V	M	F	C	D	A	H	T	.	.	.	.	.	.	.	.	D	T	I	S	D	L	F	D	V	L	C	L	N	R	Y	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	G	W	Y	V	Q	S	G	D	L	E	T	A	E	K	V	L	E	K	E	L	L	A	W	Q	E	K
Query Conservation																			.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																																																																																.
Template Sequence		P	H	L	Q	V	G	G	P	A	I	C	G	G	S	D	E	W	I	T	D	F	L	H	F	C	A	E	R	R	V	P	V	D	F	V	S	R	H	A	Y	T	S	K	A	P	H	K	K	T	F	E	Y	Y	Y	Q	E	L	E	P	P	E	D	M	L	E	Q	F	K	T	V	R	A	L	I	R	Q	S	P	.	F
Template Known Secondary structure		T	T										S	S		T													T	T													B		S		S				S	S						B																				S	S	.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.		.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		L	H	Q	P	I	I	I	T	E	Y	G	V	D	T	L	A	G	L	H	S	M	Y	T	D	M	W	S	E	E	Y	Q	C	A	W	L	D	M	Y	H	R	V	F	D	R	V	S	A	V	V	G	E	Q	V	W	N	F	A	D	.	F	A	T	S	Q	G	I	L	R	V	G	G	N	K	K	G	I	F	T	R	D
Query Conservation																																																												.
Alig confidence																							.	.	.	.	.														.	.																		.
Template Conservation																							.	.	.	.	.														.	.
Template Sequence		P	H	L	P	L	H	I	T	E	Y	N	T	S	Y	S	P	I	N	P	V	H	.	.	.	.	.	D	T	A	L	N	A	A	Y	I	A	R	I	L	.	.	S	E	G	G	D	Y	V	D	S	F	S	Y	W	T	F	S	D	V	F	E	E	M	D	V	P	K	A	L	F	H	G	G	F	G	L	V	A	L	H
Template Known Secondary structure		T	T										S		S		T	T		G	G	G	.	.	.	.	.	G	S												.	.			G	G	G	T		S					S		S	B	S				T	T	S	S		S	S	S	S	S			S		S			T	T
Template Predicted Secondary structure																							.	.	.	.	.														.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290						.	.	.	.	.	.	.	.	.	300	.	.	.			.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		575	.	.	.	.	580	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	P	K	S	A	A	F	L	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	P	K	P	T	F	H	A	F	T
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions