Job Description P05804 Confidence 99.78% Date Thu Jan 5 10:58:55 GMT 2012 Rank 61 Aligned Residues 306 % Identity 12% Template c1xc6A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-galactosidase; PDBTitle: native structure of beta-galactosidase from penicillium sp. in complex2 with galactose Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.																	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	S	V	A	V	K	G	E	Q	F	L	I	N	H	K	P	F	Y	F	T	G	F	G	R	H	E	D	A	D	L	R	G	K	G	F	D	N	V	L	M	V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	S	H	Y	P	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.
Template Sequence		K	Y	V	T	W	D	E	H	S	I	F	V	N	G	E	R	L	M	I	F	S	G	E	V	H	P	Y	.	.	.	.	.	R	L	P	V	A	S	L	Y	I	D	I	F	E	K	V	K	A	L	G	F	N	C	V	S	F	Y	V	D	W	A	L	L	E	G	N	P	G	H	Y	S	A	E	G	I	F	D	L	Q
Template Known Secondary structure		S	S					S	S					T	T												G	G	.	.	.	.	.	G	S			G	G	G										T	T	T															S	B	T	T	B					G	G	G		S
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70						.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400						.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure																																																																			.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.
Query Sequence		E	M	L	D	W	A	D	E	H	G	I	V	V	I	D	E	T	A	A	V	G	F	N	L	S	L	G	I	G	F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	D	K	.	.	.	.	.	N	H	P	S	V	V	M	W	S	I
Query Conservation																																																																			.	.	.	.	.
Alig confidence																																									.																										.	.	.	.	.
Template Conservation																																									.
Template Sequence		P	F	F	D	A	A	K	E	A	G	I	Y	L	L	A	R	P	G	P	Y	I	N	A	E	V	S	G	G	G	F	P	G	W	L	Q	R	V	D	G	.	I	L	R	T	S	D	E	A	Y	L	K	A	T	D	N	Y	A	S	N	I	A	A	T	I	A	K	A	Q	I	T	N	G	G	P	I	I	L	Y	Q	P
Template Known Secondary structure											T									S				T	T	B	G	G	G	G			G	G	G	G	G		S	S	.		T	T	S	S																						T	B	G	G	G	T	S	S
Template Predicted Secondary structure																																									.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		411	.	.	.	.	.	.	.	.	420	.						.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.		.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure													.	.	.	.	.																																					.
Query SS confidence													.	.	.	.	.																																					.
Query Sequence		A	N	E	P	D	T	R	P	Q	G	A	.	.	.	.	.	R	E	Y	F	A	P	L	A	E	A	T	R	K	L	D	P	T	R	P	I	T	C	V	N	V	M	F	C	D	A	H	T	D	T	I	S	.	D	L	F	D	V	L	C	L	N	R	Y	Y	G	W	Y	V	Q	S	G	D	L	E	T	A	E	K	V
Query Conservation													.	.	.	.	.																																					.
Alig confidence													.	.	.	.	.																																					.
Template Conservation
Template Sequence		E	N	E	Y	S	G	A	C	C	G	Y	N	G	F	P	D	G	S	Y	M	Q	Y	I	E	D	H	A	R	D	A	G	I	V	V	P	F	I	S	N	D	A	W	A	A	G	H	N	A	P	G	T	G	A	G	A	V	D	I	Y	G	H	D	S	Y	P	L	G	F	D	C	A	N	P	S	T	W	P	S	G	N
Template Known Secondary structure		S	S					B		T	T					S															T	T			S		B	B			B	S	S	S	S		T	T		T	T	S		T	T			S	B							T	T		S			S	S	T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		485	.	.	.	.	490	.	.	.	.			.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540								.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
Predicted Secondary structure												.	.																																															.	.	.	.	.	.	.
Query SS confidence												.	.																																															.	.	.	.	.	.	.
Query Sequence		L	E	K	E	L	L	A	W	Q	E	.	.	K	L	H	Q	P	I	I	I	T	E	Y	G	V	D	T	L	A	G	L	H	S	M	Y	T	D	M	W	S	E	E	Y	Q	C	A	W	L	D	M	Y	H	R	V	F	D	R	V	.	.	.	.	.	.	.	S	A	V	V	G	E	Q	V	W	N	F	A	D	F	A
Query Conservation												.	.																																															.	.	.	.	.	.	.
Alig confidence												.	.																																															.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	T	Y	F	H	T	S	H	E	Q	Q	S	P	S	T	P	Y	S	L	V	E	F	Q	G	G	A	F	D	P	W	G	G	V	G	F	A	K	C	A	A	L	L	N	H	E	F	E	R	V	F	Y	K	N	D	F	S	F	G	V	A	F	L	N	L	Y	M	I	F	G	G	T	N	W	G	N	L	G	H	P
Template Known Secondary structure		S													T	T	S									S						T	T											T	S													T	T	T		S											B			T	T		B		T
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.		.	580	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		T	S	Q	G	I	L	R	V	G	G	N	K	K	G	I	F	T	R	D	R	K	P	K	.	S	A	A	F	L	L	Q	K	R
Query Conservation																									.
Alig confidence												.	.	.	.										.
Template Conservation												.	.	.	.
Template Sequence		G	G	Y	T	S	Y	D	Y	G	S	.	.	.	.	A	I	S	E	S	R	N	I	T	R	E	K	Y	S	E	L	K	L	L
Template Known Secondary structure		T	S		S	B			T	T		.	.	.	.	S	B		T	T	S				S
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.					.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions