Job Description P05804 Confidence 99.67% Date Thu Jan 5 10:58:55 GMT 2012 Rank 85 Aligned Residues 267 % Identity 14% Template c1uhvD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:beta-xylosidase; PDBTitle: crystal structure of beta-d-xylosidase from2 thermoanaerobacterium saccharolyticum, a family 393 glycoside hydrolase Resolution 2.10 Å

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		309	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.																								.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	M	V	H	D	H	A	L	M	.	D	W	I	G	A	N	S	Y	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	Y	P	Y	A	E	E	M	L	D	W	A	D	E	H	G	I	V	V	I	D	E	T	A	A	V	G	F	N	L	S	L	G	I	G
Query Conservation												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	Y	I	E	T	L	K	Y	V	K	E	N	I	D	F	K	Y	I	R	G	H	G	L	L	C	D	D	V	G	I	Y	R	E	D	V	V	G	D	E	V	K	P	F	Y	N	F	T	Y	I	D	R	I	F	D	S	F	L	E	I	G	I	R	P	F	V	E	I	G	F	M	P	K	K	L	A	S	G	T	Q
Template Known Secondary structure													T	T	S								S		T	T	S	T	T	T	T								T	T																						T										B		G	G	G	B	S	S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.								.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure																																					.																.	.	.	.	.	.	.
Query SS confidence																																					.																.	.	.	.	.	.	.
Query Sequence		F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	D	.	K	N	H	P	S	V	V	M	W	S	I	A	N	E	P	.	.	.	.	.	.	.	D	T	R	P	Q	G	A	R	E	Y	F	A	P	L	A	E	A	T	R	K	L	D
Query Conservation																																					.																.	.	.	.	.	.	.
Alig confidence						.	.																														.																.	.	.	.	.	.	.
Template Conservation						.	.
Template Sequence		T	V	F	Y	.	.	W	E	G	N	V	T	P	P	K	D	Y	E	K	W	S	D	L	V	K	A	V	L	H	H	F	I	S	R	Y	G	I	E	E	V	L	K	W	P	F	E	I	W	N	E	P	N	L	K	E	F	W	K	D	A	D	E	K	E	Y	F	K	L	Y	K	V	T	A	K	A	I	K	E	V	N
Template Known Secondary structure				T	T	.	.	T	T				S		B	S																										T	T						S	S		T	T	S	T	T	T	S	G	G	G
Template Predicted Secondary structure						.	.
Template SS confidence
		113	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		437	.	.	440	.	.	.	.	.	.	.	.	.	450									.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.													.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	T	R	P	I	T	C	V	N	V	M	F	C	D	.	.	.	.	.	.	.	.	A	H	T	D	T	I	S	D	L	F	D	V	L	C	L	N	R	Y	Y	G	W	Y	V	Q	S	G	D	.	.	.	.	.	.	.	.	.	.	.	.	L	E	T	A	E	K	V	L	E	K	E	L	L	A	W	Q	E	K	L
Query Conservation																.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																																																													.
Template Sequence		E	N	L	K	V	G	G	P	A	I	C	G	G	A	D	Y	W	I	E	D	F	L	N	F	C	Y	E	E	N	V	P	V	D	F	V	S	R	H	A	Y	T	S	K	Q	G	E	Y	T	P	H	L	I	Y	Q	E	I	M	P	S	E	Y	M	L	N	E	F	K	T	V	R	E	I	I	K	N	.	S	H	F	P
Template Known Secondary structure		T	T	S									S	S		T												T	T	T				S									B							S	S						B																			T	.	S	S	S	T
Template Predicted Secondary structure																																																																													.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.		.	.	570	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		H	Q	P	I	I	I	T	E	Y	G	V	D	T	L	A	G	L	H	S	M	Y	T	D	M	W	S	E	E	Y	Q	C	A	W	L	D	M	Y	H	R	V	F	D	R	V	S	A	V	V	G	E	Q	V	W	N	F	A	D	F	A	T	S	Q	G	I	L	R	V	G	G	N	K	.	K	G	I	F	T	R	D	R
Query Conservation																																																																									.
Alig confidence																						.	.	.	.	.																				.	.																										.
Template Conservation																						.	.	.	.	.																				.	.
Template Sequence		N	L	P	F	H	I	T	E	Y	N	T	S	Y	S	P	Q	N	P	V	H	.	.	.	.	.	D	T	P	F	N	A	A	Y	I	A	R	I	L	S	E	G	G	D	Y	.	.	V	D	S	F	S	Y	W	T	F	S	D	V	F	E	E	R	D	V	P	R	S	Q	F	H	G	G	F	G	L	V	A	L	N	M
Template Known Secondary structure		T										S		S		T	T		G	G	G	.	.	.	.	.	G	S																		.	.		S					S		S	B	S				T	T	S	S			S	S		S			S		S			T	T	T
Template Predicted Secondary structure																						.	.	.	.	.																				.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.						290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		576	.	.	.	580	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	K	S	A	A	F	L	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	K	P	T	F	Y	T	F	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions