Job Description P05804 Confidence 98.11% Date Thu Jan 5 10:58:55 GMT 2012 Rank 152 Aligned Residues 252 % Identity 16% Template c1nofA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:xylanase; PDBTitle: the first crystallographic structure of a xylanase from2 glycosyl hydrolase family 5: implications for catalysis Resolution 1.42 Å

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		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.							.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.
Query Sequence		F	T	G	F	G	R	H	E	D	A	D	L	R	G	K	G	F	D	N	V	L	M	V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	S	H	Y	P	Y	A	E	E	M	.	.	.	.	.	.	L	D	W	A	D	E	H	G	I	V	V	I	D	E	T	A	A	V	G	F	N	L	S	L	G	I
Query Conservation																																																		.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.
Template Conservation
Template Sequence		I	Q	G	F	G	G	M	S	G	V	G	W	I	N	D	L	T	T	E	Q	I	N	T	A	Y	G	S	G	V	G	Q	I	G	L	S	I	M	R	V	R	I	D	P	D	S	S	K	W	N	I	Q	L	P	S	A	R	Q	A	V	S	L	G	A	K	I	M	A	T	P	W	S	P	P	A	Y	M	K	S	N	N
Template Known Secondary structure											B	T	T	B															S	T	T													S	S	G	G	G	G	G	G	G										T	T								S				G	G	G	B	T	T	S
Template Predicted Secondary structure
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.		.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.							420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure																																									.																		.	.	.	.	.	.
Query SS confidence																																									.																		.	.	.	.	.	.
Query Sequence		G	F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	D	K	N	H	.	P	S	V	V	M	W	S	I	A	N	E	P	D	T	R	P	Q	.	.	.	.	.	.	G	A	R	E	Y	F	A	P	L	A	E	A	T	R	K	L	D
Query Conservation																																									.																		.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.																							.																		.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.
Template Sequence		S	L	I	N	G	G	R	L	.	.	.	.	.	.	.	.	.	L	P	A	N	Y	S	A	Y	T	S	H	L	L	D	F	S	K	Y	M	Q	T	N	G	A	P	L	Y	A	I	S	I	Q	N	E	P	D	W	K	P	D	Y	E	S	C	E	W	S	G	D	E	F	K	S	Y	L	K	S	Q	G	S	K	F	G
Template Known Secondary structure		S	S	B	S			B	B	.	.	.	.	.	.	.	.	.		G	G	G																		T	T				S				S		S		T	T				S	S	B			B														G	G	G	G	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.										.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.							.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
Predicted Secondary structure																			.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.
Query Sequence		P	T	R	P	I	T	C	V	N	V	M	F	C	D	A	H	T	.	.	.	.	.	.	D	T	I	S	D	L	F	D	V	L	C	L	N	R	Y	Y	G	W	Y	V	Q	S	G	D	L	E	T	A	E	K	V	L	E	K	E	L	L	A	W	Q	E	K	L	H	Q	P	I	I	I	T	E	Y	G	V	D	T	L
Query Conservation																			.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	K	V	I	V	A	E	S	L	G	F	N	P	A	L	T	D	P	V	L	K	D	S	D	A	S	K	Y	V	S	I	I	G	G	H	L	Y	G	T	T	P	K	P	Y	P	L	A	Q	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	Q	L	W	M	T	E	H	Y	V	D	S	K
Template Known Secondary structure		T	S								T	T			G	G	G	T					T						T	T									T	T	S											T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T										S		T	T
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.																.	.	.	.	250	.	.	.	.	.	.	.	.	.
		511	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	L	H	S	M	Y	T	D	M	W	S	E	E	Y	Q	C	A	W	L	D	M	Y	H	R	V	F	D	R	V	S	A	V	V	G	E	Q	V	W	N	F	A	D	F	A	T	S	Q	G	I	L	R	V	G	G	N	K	K	G	I	F	T	R	D	R	K	P	K	S	A	A	F	L	L	Q	K	R
Query Conservation
Alig confidence						.	.	.	.	.	.	.																			.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.																			.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	S	A	N	.	.	.	.	.	.	.	N	W	T	S	A	I	E	V	G	T	E	L	N	A	S	M	V	S	.	.	N	Y	S	A	Y	V	W	W	Y	I	R	R	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	L	T	E	D	G	K	V	S	K	R	G	Y	V	M	S	Q	Y
Template Known Secondary structure		S		T	T	.	.	.	.	.	.	.																		T	.	.	T									S	B	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	B		T	T	S		B
Template Predicted Secondary structure						.	.	.	.	.	.	.																			.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		260	.	.	.								.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290	.	.	.	.	.														.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions