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Job DescriptionP05804
Confidence84.27%DateThu Jan 5 10:58:55 GMT 2012
Rank196Aligned Residues128
% Identity17%Templatec1m04A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-n-acetylhexosaminidase; PDBTitle: mutant streptomyces plicatus beta-hexosaminidase (d313n) in complex2 with product (glcnac)
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   306...310.........320.........330 ..... ....340.........350.
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Query Sequence  FDNVLMVHDHALMDWIGANSYRTSH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YPYAE. . EMLDWADEHGIVVIDE
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Template Sequence  FGVDEVKRYIDRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGSTEVGGGPGGYYTKAEYKEIVRYAASRHLEVVPE
Template Known Secondary structure 

TTT


B
SS
B
B

TTSTTTTS

TTSS



B
TT
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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   352.......360.........370...... ...380.........390.........400.........410....... ..
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Query Sequence  TAAVGFNLSLGIGFEAGNKPKELYS. . . . . . . . . . . EEAVNGETQQAHLQAIKELIARDKNHPSVVMWSIANEPDTR. PQ
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Template Sequence  IDMPGHTNAALASYAELNCDGVAPPLYTGTKVGFSSLCVDKDVTYDFVDDVIGELAALT. . . PGRYLHIGGNEAHSTPKA
Template Known Secondary structure 


SSS

GGGSTTS






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S




TT
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   245....250.........260.........270.........280.........290.........300... ......310.........320.
 
   420.........430......
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Query Sequence  GAREYFAPLAEATRKLD
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Template Conservation      
       
   
Template Sequence  DFVAFMKRVQPIVAKYG
Template Known Secondary structure  TT
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   322.......330........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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