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Job DescriptionP05804
Confidence81.44%DateThu Jan 5 10:58:55 GMT 2012
Rank206Aligned Residues134
% Identity13%Templatec1jgiA_
PDB info PDB header:transferaseChain: A: PDB Molecule:amylosucrase; PDBTitle: crystal structure of the active site mutant glu328gln of2 amylosucrase from neisseria polysaccharea in complex with3 the natural substrate sucrose
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   307..310.........320........ .330.... .....340.........350.........
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Query Sequence  DNVLMVHDHALMDWIGANSYRT. . . . . . . . . . . . SHYPYA. . . . . . . . . . . . . . . EEMLDWADEHGIVVIDETAAVGFNL
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Template Sequence  DLKGLKDKIPYFQELGLTYLYLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDFIFNHTSN
Template Known Secondary structure  STT
S


B


SS
STTTTS
S
SSSB
TTT

TT


ST
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   111........120.........130.........140.........150.........160.........170.........180.........190
 
   360.........370.........380.........390
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SLGIGFEAGNKPKELYSEEAVNGETQQAHLQ
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Template Sequence  EHEWAQRCAAGDPLFDNFYYIFPDRRMPDQYDRTLREIFPDQHPGGFSQLEDGRWVWTTFNSFQWDLNYSNPWVFRAMAG
Template Known Secondary structure  TST
GGGTTSB
SSSTS


S
TTT
STT
TTS

SS
TTB
TTS
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   191........200.........210.........220.........230.........240.........250.........260.........270
 
   391........400.........410..... ....420.........430.........440...
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Query Sequence  AIKELIARDKNHPSVVMWSIANEPD. . . . . . . TRPQGAREYFAPLAEATRKLDPTRPITC
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Template Sequence  EMLFLA. . . NLGVDILRMDAVAFIWKQMGTSCENLPQAHALIRAFNAVMRIAAPAVFFKS
Template Known Secondary structure  ...TTT

TGGGS


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TT
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   271..... ...280.........290.........300.........310.........320.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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