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Job DescriptionP05804
Confidence97.91%DateThu Jan 5 10:58:55 GMT 2012
Rank157Aligned Residues129
% Identity10%Templatec1j0yD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:beta-amylase; PDBTitle: beta-amylase from bacillus cereus var. mycoides in complex2 with glucose
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   307..310.........320.........330.... .....340.........350......... 360...
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Query Sequence  DNVLMVHDHALMDWIGANSYRTSHYPYA. . . . . . . . . . . . . . EEMLDWADEHGIVVIDETAAVGFNL. . . . . . . . . SLGI
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Template Sequence  NWETFENDLRWAKQNGFYAITVDFWWGDMEKNGDQQFDFSYAQRFAQSVKNAGMKMIPIISTHQCGGNVGDDCNVPIPSW
Template Known Secondary structure 
TTT
SSTT



TT

S
BSSSTT



B


GG
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   27..30.........40.........50.........60.........70.........80.........90.........100......
 
   364.....370.........380. ........390....... ..400.........410
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Query Sequence  GFEAGNKPKELYSEEAVN. . . . . . . . . . . . . . . GETQQAHLQAIKELIA. . . . . . . . . . . . . . . . . . RDKNHPSVVMWSI
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Template Sequence  VWNQKSDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFAAAMKPYKDVIAKIYLSGGPAGELRYPSYTTSDGTGY
Template Known Secondary structure  GGGG
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SS
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GGGGGGB



SGGGBSS




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T
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   107..110.........120.........130.........140.........150.........160.........170.........180......
 
   411...... ..420.........430.....
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Query Sequence  ANEPDTR. . . . . . PQGAREYFAPLAEATRKL
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Template Sequence  PSRGKFQAYTEFAKSKFRLWVLNKYGSLNEV
Template Known Secondary structure  TS






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   187..190.........200.........210.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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