Job Description P05804 Confidence 79.19% Date Thu Jan 5 10:58:55 GMT 2012 Rank 210 Aligned Residues 92 % Identity 20% Template c1bagA_ PDB info PDB header:alpha-amylase Chain: A: PDB Molecule:alpha-1,4-glucan-4-glucanohydrolase; PDBTitle: alpha-amylase from bacillus subtilis complexed with2 maltopentaose Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.																					.	330	.	.	.	.																.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	N	V	L	M	V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	Y	P	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	M	L	D	W	A	D	E	H	G	I	V	V	I	D	E
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	F	N	T	L	K	H	N	M	K	D	I	H	D	A	G	Y	T	A	I	Q	T	S	P	I	N	Q	V	K	E	G	N	Q	G	D	K	S	M	S	N	W	Y	W	L	Y	Q	P	T	S	Y	Q	I	G	N	R	Y	L	G	T	E	Q	E	F	K	E	M	C	A	A	A	E	E	Y	G	I	K	V	I	V	D
Template Known Secondary structure									T							T	T		S					S								T	G	G	G				G	G	G	G	G	G	G	G										T	T	T															T	T	T
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.																									.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	A	V	G	F	N	L	S	L	G	I	G	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	I	N	H	T	T	F	D	Y	A	A	I	S	N	E	V	K	S	I	P	N	W	T	H	G	N	T	Q	I	K	N	W	S	D	R	W	D	V	T	Q	N	S	L	L	G	L	Y	D	W	N	T	Q	N	T	Q	V	Q	S	Y	L	K	R	F	L	E	R	A	L	N	D
Template Known Secondary structure					S	B			S		G	G	G	S						T	S	T	T							B				T	T								S	B	S	T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions