Return to main results Retrieve Phyre Job Id

Job DescriptionP52061
Confidence100.00%DateWed Jan 25 15:20:57 GMT 2012
Rank6Aligned Residues181
% Identity33%Templated1b78a_
SCOP infoAnticodon-binding domain-like ITPase-like ITPase (Ham1)
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  KVVLATGNVGKVRELASLLSDFGLDIVAQTDLGVDSAEETGLTFIENAILKARHAAKVTALPAIADDSGLAVDVLGGAPG
Query Conservation 

  

 
  
  
   

    
 
           

   
  


  

  
      


 




 
 

 
 

Alig confidence 


































...









































Template Conservation 

  

 
  
  
   

       
        ...
   
  


  

         








 
 

 
 

Template Sequence  KIYFATGNPNKIKEANIILKDLKDVEIEQIKISYP. . . EIQGTLEEVAEFGAKWVYNILKKPVIVEDSGFFVEALNGFPG
Template Known Secondary structure 

S
TTT
TT






...

SS

S
GGGTT
Template Predicted Secondary structure 













...

















Template SS confidence 















































































   10.........20.........30.........40.... .....50.........60.........70.........80......
 
   83......90.........100.........110.........120.........130.........140.........150.. .......160.
Predicted Secondary structure 



























.




Query SS confidence 





































































.








Query Sequence  IYSARYSGEDATDQKNLQKLLETMKDVPDDQRQARFHCVLVYLRHAEDPTPLVCHGSWPGVITREPAGTG. GFGYDPIFF
Query Conservation   

 
              

  
       
 
     

            
 
   
 
   


  .




 

 
Alig confidence 






.....













..














...























.








Template Conservation 
 
    .....       

  
  ..   
 
     
   ...       
 
   
 
   
 
   




 

 
Template Sequence  TYSKFVQ. . . . . ETIGNEGILKLLEG. . KDNRNAYFKTVIGYC. . . DENGVRLFKGIVKGRVSEEIRSKGYGFAYDSIFI
Template Known Secondary structure  TT.....TTT..
S

...TT
SS


SS

SGGGGS
Template Predicted Secondary structure 


.....





..



...
















Template SS confidence 















































































   87..90... ......100....... ..110.........120.. .......130.........140.........150......
 
   162.......170.........180.........190......
Predicted Secondary structure 










Query SS confidence 


































Query Sequence  VPSEGKTAAELTREEKSAISHRGQALKLLLDALRN
Query Conservation 
 
  

 


   


 



  
  

   
  
Alig confidence 


































Template Conservation 
 
  

 


   


 



  
  

   
 
Template Sequence  PEEEERTFAEMTTEEKSQISHRKKAFEEFKKFLLD
Template Known Secondary structure  TT
SS
GGGS
TTTST
Template Predicted Secondary structure 










Template SS confidence 


































   157..160.........170.........180.........190.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions