Return to main results Retrieve Phyre Job Id

Job DescriptionP52061
Confidence39.84%DateWed Jan 25 15:20:57 GMT 2012
Rank20Aligned Residues82
% Identity21%Templatec3onoA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:ribose/galactose isomerase; PDBTitle: crystal structure of ribose-5-phosphate isomerase lacab_rpib from2 vibrio parahaemolyticus
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.... .....20.........30.........40.........50.........60. ........70.....
Predicted Secondary structure 

......














.




Query SS confidence 











. . . . . .














































.













Query Sequence  KVVLATGNVGKV. . . . . . RELASLLSDFGLDIVAQTDLGVDSAEETGLTFIENAILKARHAAKVT. ALPAIADDSGLAVD
Query Conservation 

  

 
  
 ...... 
   

    
 
           

   
  


  

  
    .  


 




 
 
Alig confidence 











......














...




























.













Template Conservation 



  



 
 
  
 
 

  
   
 

 ...
 
        




 
  

  
 

  
 









 
Template Sequence  KIALXXENSQAAKNAXVAGELNSVAGGLGHDVF. . . NVGXTDENDHHLTYIHLGIXASILLNSKAVDFVVTGCGTGQGAL
Template Known Secondary structure 


GGGGGGTT
...
S
SSTTSS


TTS
SSSS
Template Predicted Secondary structure 


...



















Template SS confidence 















































































   2.......10.........20.........30.... .....40.........50.........60.........70........
 
   76...80.......
Predicted Secondary structure  .







Query SS confidence  .











Query Sequence  . VLGGAPGIYSAR
Query Conservation  .

 
 

 

 
Alig confidence  .











Template Conservation 





 





Template Sequence  XSCNLHPGVVCGY
Template Known Secondary structure  TSTT

Template Predicted Secondary structure 




Template SS confidence 












   7980.........90.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions