Job Description P52061 Confidence 6.74% Date Wed Jan 25 15:20:57 GMT 2012 Rank 84 Aligned Residues 74 % Identity 18% Template c3eplA_ PDB info PDB header:transferase/rna Chain: A: PDB Molecule:trna isopentenyltransferase; PDBTitle: crystallographic snapshots of eukaryotic2 dimethylallyltransferase acting on trna: insight into trna3 recognition and reaction mechanism Resolution 3.60 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.											.	.	.	40	.	.	.																			.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	L	A	T	G	N	V	G	K	V	R	E	L	A	S	L	L	S	D	F	G	L	D	I	V	A	Q	T	D	L	G	V	.	.	.	.	.	.	.	.	.	.	D	S	A	E	E	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	F	I	E	N	A	I	L	K	A	R
Query Conservation																																			.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	A	G	T	T	G	V	G	K	S	Q	L	S	I	Q	L	A	Q	K	F	N	G	E	V	I	N	S	D	S	M	Q	V	Y	K	D	I	P	I	I	T	N	K	H	P	L	Q	E	R	E	G	I	P	H	H	V	M	N	H	V	D	W	S	E	E	Y	Y	S	H	R	F	E	T	E	C	M	N	A	I	E
Template Known Secondary structure							S	S	S													T	T		B						T	T	T	S	S	S	S										G	G	G	G	T	T					S		S		S		S	S
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	A	K	V	T	A	L	P	A	I	A	D	D	S	G	L	A	V	D	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	H	R	R	G	K	I	P	I	V	V	G	G	T	H	Y	Y	L	Q	T	L
Template Known Secondary structure					T	T	T			B					S		T	T	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions