Job Description P52061 Confidence 25.56% Date Wed Jan 25 15:20:57 GMT 2012 Rank 29 Aligned Residues 74 % Identity 22% Template c3d3qB_ PDB info PDB header:transferase Chain: B: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: crystal structure of trna delta(2)-isopentenylpyrophosphate2 transferase (se0981) from staphylococcus epidermidis.3 northeast structural genomics consortium target ser100 Resolution 2.70 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30							.	.	.	.	.	.					.	.	.	40	.																			.	.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.							.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.							.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	L	A	T	G	N	V	G	K	V	R	E	L	A	S	L	L	S	D	F	G	L	D	I	V	A	.	.	.	.	.	.	Q	T	D	L	G	V	.	.	.	.	D	S	A	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	L	T	F	I	E	N	A	I	L	K	A	R
Query Conservation																													.	.	.	.	.	.							.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.							.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	V	G	P	T	A	S	G	K	T	E	L	S	I	E	V	A	K	K	F	N	G	E	I	I	S	G	D	S	X	Q	V	Y	Q	G	X	D	I	G	T	A	K	V	T	T	E	E	X	E	G	I	P	H	Y	X	I	D	I	L	P	P	D	A	S	F	S	A	Y	E	F	K	K	R	A	E	K	Y	I	K
Template Known Secondary structure						S	T	T	S	S												T	T								S	S	T	T	B	T	T			T	T	T	T				T	T	T	T	T	T					S	S	S		B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	A	K	V	T	A	L	P	A	I	A	D	D	S	G	L	A	V	D	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	T	R	R	G	K	V	P	I	I	A	G	G	T	G	L	Y	I	Q	S	L
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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