Return to main results Retrieve Phyre Job Id

Job DescriptionP00946
Confidence94.41%DateThu Jan 5 10:57:17 GMT 2012
Rank86Aligned Residues68
% Identity13%Templated2et1a1
SCOP infoDouble-stranded beta-helix RmlC-like cupins Germin/Seed storage 7S protein
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Predicted Secondary structure 




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Query Sequence  AFSLHDLSDKETTISQ. . . QSAAILFCVEGDATLWKGSQ. . . . . . . . QLQLKPGESAFIAANESPVTVK. . . GHGRLARV
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Template Sequence  SMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVS
Template Known Secondary structure 
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S


GGGTT

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   73......80.........90.........100.........110.........120.........130.........140.........150..
 
   388.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  YN
Query Conservation 
 
Alig confidence 

Template Conservation 
 
Template Sequence  FN
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 

   153.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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