Job Description P00946 Confidence 100.00% Date Thu Jan 5 10:57:17 GMT 2012 Rank 2 Aligned Residues 377 % Identity 32% Template d1pmia_ SCOP info Double-stranded beta-helix RmlC-like cupins Type I phosphomannose isomerase Resolution 1.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.				.	.	.	.	.	20	.	.	.	.						.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																.	.	.											.	.	.	.	.
Query SS confidence																.	.	.											.	.	.	.	.
Query Sequence		M	Q	K	L	I	N	S	V	Q	N	Y	A	W	G	.	.	.	S	K	T	A	L	T	E	L	Y	G	.	.	.	.	.	M	E	N	P	S	S	Q	P	M	A	E	L	W	M	G	A	H	P	K	S	S	S	R	V	Q	N	A	A	G	D	I	V	S	L	R	D	V	I	E	S	D	K	S	T	L	L	G	E
Query Conservation																.	.	.											.	.	.	.	.
Alig confidence																.	.	.											.	.	.	.	.																												.	.
Template Conservation																																																													.	.
Template Sequence		L	F	R	I	Q	C	G	Y	Q	N	Y	D	W	G	K	I	G	S	S	S	A	V	A	Q	F	V	H	N	S	D	P	S	I	T	I	D	E	T	K	P	Y	A	E	L	W	M	G	T	H	P	S	V	P	S	K	A	I	D	L	.	.	N	N	Q	T	L	R	D	L	V	T	A	K	P	Q	E	Y	L	G	E
Template Known Secondary structure													T	T	B			G	G	G	S											T	T	S				T	T	S								S			T	T	S					T	T	T	.	.	T	T															T
Template Predicted Secondary structure																																																													.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		73	.	.	.	.	.	.	80				.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		A	V	A	K	R	F	G	E	.	.	.	L	P	F	L	F	K	V	L	C	A	A	Q	P	L	S	I	Q	V	H	P	N	K	H	N	S	E	I	G	F	A	K	E	N	A	A	G	I	P	M	D	A	A	E	R	N	Y	K	D	P	N	H	K	P	E	L	V	F	A	L	T	P	F	L	A	M	N	A	F	R
Query Conservation										.	.	.
Alig confidence										.	.	.																																	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.
Template Sequence		S	I	I	T	K	F	G	S	S	K	E	L	P	F	L	F	K	V	L	S	I	E	K	V	L	S	I	Q	A	H	P	D	K	K	L	G	A	Q	L	H	A	A	D	.	.	.	.	.	.	.	.	.	.	P	K	N	Y	P	D	D	N	H	K	P	E	M	A	I	A	V	T	D	F	E	G	F	C	G	F	K
Template Known Secondary structure										S	S	S		S									S	S																					.	.	.	.	.	.	.	.	.	.	T	T	T			S	S										S	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.											.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170																			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Query Sequence		E	F	S	E	I	V	S	L	L	Q	P	V	A	G	A	H	P	A	I	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	Q	Q	P	D	A	E	R	L	S	E	L	F	A	S	L	L	N	M	Q	G	E	E	K	S	R	A	L	A	I	L	K	S	A	L	D	S	Q	.	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Template Conservation
Template Sequence		P	L	D	Q	L	A	K	T	L	A	T	V	P	E	L	N	E	I	I	G	Q	E	L	V	D	E	F	I	S	G	I	K	L	P	A	E	V	G	S	Q	D	D	V	N	N	R	K	L	L	Q	K	V	F	G	K	L	M	N	T	D	D	D	V	I	K	Q	Q	T	A	K	L	L	E	R	T	D	R	E	P	Q
Template Known Secondary structure																																			S			T	T	S																			T	S
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure		.	.	.	.	.																									.
Query SS confidence		.	.	.	.	.																									.
Query Sequence		.	.	.	.	.	Q	G	E	P	W	Q	T	I	R	L	I	S	E	F	Y	P	E	D	S	G	L	F	S	P	.	L	L	L	N	V	V	K	L	N	P	G	E	A	M	F	L	F	A	E	T	P	H	A	Y	L	Q	G	V	A	L	E	V	M	A	N	S	D	N	V	L	R	A	G	L	T	P	K	Y	I	D
Query Conservation		.	.	.	.	.																									.
Alig confidence		.	.	.	.	.																									.
Template Conservation
Template Sequence		V	F	K	D	I	D	S	R	L	P	E	L	I	Q	R	L	N	K	Q	F	P	N	D	I	G	L	F	C	G	C	L	L	L	N	H	V	G	L	N	K	G	E	A	M	F	L	Q	A	K	D	P	H	A	Y	I	S	G	D	I	I	E	C	M	A	A	S	D	N	V	V	R	A	G	F	T	P	K	F	K	D
Template Known Secondary structure					T	T		T	T												S	T	T		T					T	T	T	T								T	T							T	T																S									S		S	S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.								.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.					.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.																											.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.																											.	.	.	.
Query Sequence		I	P	E	L	V	A	N	V	K	F	E	A	K	P	A	N	Q	L	L	T	Q	P	V	K	.	.	.	.	.	.	.	Q	G	A	E	L	D	F	P	I	P	V	D	D	F	A	F	S	L	H	D	L	S	D	K	E	T	.	.	.	.	T	I	S	Q	Q	S	A	A	I	L	F	C	V	E	G	D	A	T	L
Query Conservation																										.	.	.	.	.	.	.																											.	.	.	.
Alig confidence																										.	.	.	.	.	.	.																											.	.	.	.
Template Conservation
Template Sequence		V	K	N	L	V	E	M	L	T	Y	S	Y	E	S	V	E	K	Q	K	M	P	L	Q	E	F	P	R	S	K	G	D	A	V	K	S	V	L	Y	D	P	P	I	A	E	F	S	V	L	Q	T	I	F	D	K	S	K	G	G	K	Q	V	I	E	G	L	N	G	P	S	I	V	I	A	T	N	G	K	G	T	I
Template Known Secondary structure																G	G	G	G	B				B			T	T				S		S								S	S	S	S										T	T	T										S	S									S
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		353	.	.	.	.	.				.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.								.	.	.	.	.	.	.	390
Predicted Secondary structure								.	.	.																									.	.	.	.	.	.	.
Query SS confidence								.	.	.																									.	.	.	.	.	.	.
Query Sequence		W	K	G	S	Q	Q	.	.	.	L	Q	L	K	P	G	E	S	A	F	I	A	A	N	E	S	P	V	T	V	K	G	H	G	.	.	.	.	.	.	.	R	L	A	R	V	Y	N	K
Query Conservation								.	.	.																									.	.	.	.	.	.	.
Alig confidence								.	.	.															.										.	.	.	.	.	.	.
Template Conservation																									.
Template Sequence		Q	I	T	G	D	D	S	T	K	Q	K	I	D	T	G	Y	V	F	F	V	A	P	G	.	S	S	I	E	L	T	A	D	S	A	N	Q	D	Q	D	F	T	T	Y	R	A	F	V	E
Template Known Secondary structure				T	T		G	G	G						T	T							T	T	.									S	S			S	S
Template Predicted Secondary structure																									.
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.		.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440