 |
Job Description | P00946 | Confidence | 95.44% | Date | Thu Jan 5 10:57:17 GMT 2012 |
Rank | 79 | Aligned Residues | 68 |
% Identity | 10% | Template | d1od5a1 |
SCOP info | Double-stranded beta-helix
| RmlC-like cupins
| Germin/Seed storage 7S protein
|
Resolution | 2.1 |
|
 |
  |   |
322 | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | |
|
. | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
| . | . |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | F | S | L | H | D | L | S | D | K | E | T | T | I | S | Q | . |
. |
Q | S | A | A | I | L | F | C | V | E | G | D | A | T | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
W | K | G | S | Q | Q | L | Q | L | K | P | G | E | S | A | F | I | A | A | N | E | S | P | V | T | V | K | G | H | G | R | L |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |
|
|   |
|   |   |
|   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |
|   |
|   |   |
|   |
|
|
|   |   |   |
|   |   |
|   |
|
|   |   |
|   |
|   |
|   |
|
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|
|
|
|   |   |   |   |   |   |
|   |
|   |   |   |
Template Sequence |   |
T | V | S | K | R | T | L | N | R | N | G | L | H | L | P | S | Y | S | P | Y | P | Q | M | I | I | V | V | Q | G | K | G | A | I | G | F | A | F | P | G | C | P | E | T | F | E | K | P | Q | D | S | H | Q | K | I | R | H | F | N | E | G | D | V | L | V | I | P | P | G | V | P | Y | W | T | Y | N | T | G | D | E | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
| T | T |
|
|
|
|  |  |  |
|
|  |  |  | S |
|  |  |  |  |  | T | T |
|  |  |  |  |
| T | T |
|
|  |  |  |  |  |
| S | S | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
  |
  |   |
385 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
A | R | V | Y | N |
Query Conservation |   |
  |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
Template Sequence |   |
V | V | A | I | S |
Template Known Secondary structure |   |
 |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
141 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|