Job Description P00946 Confidence 96.38% Date Thu Jan 5 10:57:17 GMT 2012 Rank 64 Aligned Residues 149 % Identity 12% Template c3ehkC_ PDB info PDB header:plant protein Chain: C: PDB Molecule:prunin; PDBTitle: crystal structure of pru du amandin, an allergenic protein2 from prunus dulcis Resolution 3.20 Å

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		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.				260	.	.	.	.	.	.	.	.	.									270	.	.	.	.	.																		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																						.	.	.											.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.											.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	N	P	G	E	A	M	F	L	F	A	E	T	P	H	A	Y	L	Q	.	.	.	G	V	A	L	E	V	M	A	N	S	.	.	.	.	.	.	.	.	D	N	V	L	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	T	P	K	Y	I	D	I	P	E	L	V	A	N	V
Query Conservation																						.	.	.											.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.											.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	R	E	G	D	V	V	A	I	P	A	G	V	A	Y	W	S	Y	N	D	G	D	Q	E	L	V	A	V	N	L	F	H	V	S	S	D	H	N	Q	L	D	Q	N	P	R	K	F	Y	L	A	G	N	P	E	N	E	F	N	Q	Q	G	Q	G	N	N	V	F	S	G	F	N	T	Q	L	L	A	Q	A	L
Template Known Secondary structure					T	T							T	T									S	S	S										T	T	S	T	T			S		S	S						S	S	S					S	S	S		T	T					S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.																																												.	.	310	.	.	.	.	.	.	.	.	.	320								.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Query Sequence		K	F	E	A	K	P	A	N	Q	L	L	T	Q	P	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	A	E	L	D	F	P	I	P	V	D	D	.	.	.	.	.	.	.	F
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	V	N	E	E	T	A	R	N	L	Q	G	Q	N	D	N	R	N	Q	I	I	Q	V	R	G	N	L	D	F	V	Q	P	P	R	L	E	E	T	F	C	S	L	R	L	K	E	N	I	G	N	P	E	R	A	D	I	F	S	P	R	A	G	R	I	S	T	L	N	S	H	N	L	P	I	L	R	F	L	R	L
Template Known Secondary structure		T	S						T	G	G	G		S	S			S		S					S	S	S			S	S							S	S	G	G	G									S	G	G	G		S				T	T	T							S	T	T	T		G	G	G	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.				.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.							.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.																	.	.	.	.	.	.
Query SS confidence																		.	.	.																	.	.	.	.	.	.
Query Sequence		A	F	S	L	H	D	L	S	D	K	E	T	T	I	S	Q	.	.	.	Q	S	A	A	I	L	F	C	V	E	G	D	A	T	L	W	.	.	.	.	.	.	K	G	S	Q	Q	L	Q	L	K	P	G	E	S	A	F	I	A	A	N	E	S	P	V	T	V	K	G	H	G	R	L	A	R	V	Y
Query Conservation																		.	.	.																	.	.	.	.	.	.
Alig confidence																		.	.	.																	.	.	.	.	.	.
Template Conservation
Template Sequence		S	A	E	R	G	F	F	Y	R	N	G	I	Y	S	P	H	W	N	V	N	A	H	S	V	V	Y	V	I	R	G	N	A	R	V	Q	V	V	N	E	N	G	D	A	I	L	D	Q	E	V	Q	Q	G	Q	L	F	I	V	P	Q	N	H	G	V	I	Q	Q	A	G	N	Q	G	F	E	Y	F	A
Template Known Secondary structure										T	T									S	S																			T	T	S			S							T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions